Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq464 174 4e-38 seq81 120 7e-22 seq98 93.3 1e-13 >seq464 Length=17248 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| ||||| || ||||| || ||||| || ||||| ||| Sbjct 12230 CAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTCCGAC 12171 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| || || ||||| || ||||| || ||||||||| Sbjct 12170 ACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACCAGCAA 12111 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| || || || ||||| | ||||| | || || ||| || Sbjct 12110 CGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAACATC 12051 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || ||||| Sbjct 12050 CAAAAAGAATCTACCCTTCACCTTGT 12025 Score = 156 bits (172), Expect = 1e-32 Identities = 148/189 (78%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| |||||||| || ||||| || ||||| || ||||| || ||||| ||| Sbjct 12002 CAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCTGAC 11943 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||||||||||||| || || || || || |||||||| Sbjct 11942 ACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAGCAG 11883 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || |||||||| |||||||| | || || |||| || ||| || Sbjct 11882 CGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAACATC 11823 Query 178104 CAAAAAGAA 178112 || || ||| Sbjct 11822 CAGAAGGAA 11814 Score = 125 bits (138), Expect = 2e-23 Identities = 151/204 (74%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATC 177989 || || || ||||| || || || ||||||||||||||||| ||| || || ||| Sbjct 12449 GTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC---GATACTATC 12393 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| |||||||||||||| || || ||||| || |||||||| || | Sbjct 12392 GACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTG 12333 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| || || || || || || ||||| | ||||| |||| || ||| |||| || Sbjct 12332 ATCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 12273 Query 178110 GAATCAACACTGCATCTTGTTTTG 178133 ||||| || || || || ||| || Sbjct 12272 GAATCCACCCTTCACCTGGTTCTG 12249 >seq81 Length=63167 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 62840 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 62896 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 62897 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCG 62956 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 62957 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 63016 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 63017 GAAGGTATGAA 63027 >seq98 Length=58949 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || |||||||| || || ||||||||||| || |||||||| Sbjct 33070 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAG 33011 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | || || ||| |||| || || || || ||||| || || Sbjct 33010 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGT 32955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203666778939338