Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq464 174 4e-38
seq81 120 7e-22
seq98 93.3 1e-13
>seq464
Length=17248
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || |||||||| ||||| || ||||| || ||||| || ||||| |||
Sbjct 12230 CAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTCCGAC 12171
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||| || || ||||| || ||||| || |||||||||
Sbjct 12170 ACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACCAGCAA 12111
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| ||||| || || || ||||| | ||||| | || || ||| ||
Sbjct 12110 CGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAACATC 12051
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||||||||| || || || |||||
Sbjct 12050 CAAAAAGAATCTACCCTTCACCTTGT 12025
Score = 156 bits (172), Expect = 1e-32
Identities = 148/189 (78%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| |||||||| || ||||| || ||||| || ||||| || ||||| |||
Sbjct 12002 CAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCTGAC 11943
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||||||||||||| || || || || || ||||||||
Sbjct 11942 ACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAGCAG 11883
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || |||||||| |||||||| | || || |||| || ||| ||
Sbjct 11882 CGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAACATC 11823
Query 178104 CAAAAAGAA 178112
|| || |||
Sbjct 11822 CAGAAGGAA 11814
Score = 125 bits (138), Expect = 2e-23
Identities = 151/204 (74%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATC 177989
|| || || ||||| || || || ||||||||||||||||| ||| || || |||
Sbjct 12449 GTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC---GATACTATC 12393
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| |||||||| |||||||||||||| || || ||||| || |||||||| || |
Sbjct 12392 GACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTG 12333
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||| || || || || || || ||||| | ||||| |||| || ||| |||| ||
Sbjct 12332 ATCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 12273
Query 178110 GAATCAACACTGCATCTTGTTTTG 178133
||||| || || || || ||| ||
Sbjct 12272 GAATCCACCCTTCACCTGGTTCTG 12249
>seq81
Length=63167
Score = 120 bits (132), Expect = 7e-22
Identities = 142/191 (74%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 62840 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 62896
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || || || || |||||||| ||
Sbjct 62897 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCG 62956
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| |||||||||||||| |||||||| ||||| | || || ||| || ||| ||||
Sbjct 62957 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 63016
Query 178106 AAAAGAATCAA 178116
|| | || ||
Sbjct 63017 GAAGGTATGAA 63027
>seq98
Length=58949
Score = 93.3 bits (102), Expect = 1e-13
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || ||||| || |||||||| || || ||||||||||| || ||||||||
Sbjct 33070 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAG 33011
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||| | |||||| | || || ||| |||| || || || || ||||| || ||
Sbjct 33010 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGT 32955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203666778939338
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |