Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq20 134 3e-26
seq1475 98.7 2e-15
>seq20
Length=61044
Score = 134 bits (148), Expect = 3e-26
Identities = 300/441 (68%), Gaps = 12/441 (3%)
Strand=Plus/Plus
Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGG 230261
||||| |||||| | || |||||| ||| ||| ||||||||||||| ||| ||
Sbjct 3408 GTTGAGGGTATTTTCTTCTCCGGGTCTTT-TGCTTCCATCTTTTGGCTTAAGAAGCGTGG 3466
Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321
||||||| || ||| | || |||||| ||||| ||| |||||||||||||| ||
Sbjct 3467 CCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCA-CA 3525
Query 230322 AC-AGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGT- 230378
| | |||| | |||| | | || | ||| ||||| | || | ||| ||
Sbjct 3526 CCGACTTCGCCT-GCTTGCTCTTCTCTCACCTC---AACAACCGCCCCAGCAAGAAAGTT 3581
Query 230379 --CAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATT 230436
| | | ||||| || || || || ||| ||||||||| | || || |
Sbjct 3582 GTCGAGGACATCATCGTTGAGGCTGTCTCAATCGAGAAGGAGTTCTTGACCGATGCCCTC 3641
Query 230437 CCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCC 230496
|| ||| ||| | ||||||||| | | || ||| | ||||||||||| ||||| ||
Sbjct 3642 CCCTGTGCCCTCCTCGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTGGCT 3701
Query 230497 GACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCA 230556
||||| | | || || || || ||| ||| | ||| | | |||||||| |
Sbjct 3702 GACCGTCTCCTGGTCGCTCTCGGCAACGCGAAGTACTTCAATGCCACCAACCCCTTCGAC 3761
Query 230557 TTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGAC 230616
|| |||||| || ||||| || ||||||||||||||||| ||||||||| |||||
Sbjct 3762 TTCATGGAGTCGATCTCGCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 3821
Query 230617 TATCAGAGGCCTGGTGTGATG 230637
|| |||| | | ||||| |||
Sbjct 3822 TACCAGAAGGCCGGTGTTATG 3842
>seq1475
Length=4530
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 319471 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTA 319530
||||| || ||||||||||||| |||||||| || |||| | | | ||| |
Sbjct 2096 GTGCACACCTCGTCGAGGAACCCAGAGTCGTGACTGACGATCAAACTGGTGATGTCGGTG 2037
Query 319531 AGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGC 319590
| || |||||||||| ||||||| | ||||| | ||| |||||||| || ||
Sbjct 2036 TGCTTCTTCAGGTATTCCTGCAACCACTTGACGTTGGCCACGTCCAGATGGTTAGTAGGT 1977
Query 319591 TCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 319650
||||| || || || | | || |||| ||||| ||||| || || || || ||||||
Sbjct 1976 TCGTCCAGCAGAAGCACGTCGGCCTTCATCAGCATGGCACGCGCCAGCGCCAGCTTCATT 1917
Query 319651 TTCCACCCTCCGGAAAG 319667
||||| || ||||| ||
Sbjct 1916 TTCCAACCACCGGACAG 1900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057754173037760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |