Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq155 154 2e-32
seq20 120 4e-22
>seq155
Length=53423
Score = 154 bits (170), Expect = 2e-32
Identities = 590/908 (65%), Gaps = 30/908 (3%)
Strand=Plus/Plus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
|||||||||||||| | |||| | ||| ||| ||| || | || || | | | |
Sbjct 16688 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 16747
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069
|| || |||| ||| || || ||||| || || || ||| |||| ||||| ||| ||
Sbjct 16748 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 16806
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 54126
||||| | || ||| ||| || || || | |||||| ||||| | ||| |
Sbjct 16807 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 16863
Query 54127 CATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCC 54186
| | ||| || ||||| || |||| || || | | | | || || || ||||| ||
Sbjct 16864 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGCTTGTTGCC 16923
Query 54187 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 54246
||||| || | || | ||| ||||| || | || | | ||| |||| ||||| ||
Sbjct 16924 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 16983
Query 54247 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-A 54305
||| | ||| ||||| ||| || ||| ||| | ||||| || | | | | | |
Sbjct 16984 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 17042
Query 54306 GACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 54365
|||| || || || || | || ||||| | || ||| || | || ||||| || |
Sbjct 17043 GACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 17102
Query 54366 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-- 54423
| || || || || ||| |||| | | || || || | || || | ||| | ||
Sbjct 17103 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCA--AGCTGA-GGCTGG 17158
Query 54424 --AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 54481
|||||| ||||| || | ||| || ||||| ||||| || |||| | || | |
Sbjct 17159 GGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAG 17218
Query 54482 TTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 54541
| || |||||||| || || |||||| | ||| || || || || ||||||||
Sbjct 17219 TGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATC 17278
Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601
| || |||||||| | ||| | | ||| | || ||||| ||| ||| |||
Sbjct 17279 AGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACGATCGTTCG 17338
Query 54602 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659
| || || || ||||| ||||||| ||||| || || || || | ||| | ||||
Sbjct 17339 AGGGTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGT 17396
Query 54660 TGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATCGGAGA 54717
|||||| ||| ||| || ||||| || ||| | | ||| || || ||||| |
Sbjct 17397 TGAGTTCATCAGCATACTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGC 17454
Query 54718 ATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACT--AAAT 54775
| ||| |||||| || || || |||| | | || || || || | |||
Sbjct 17455 TGGCTTCTTATTTTTCGGGTTTACGTAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAAT 17512
Query 54776 AGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAA 54835
| || || || | ||||| || || || ||||| || | || || || ||||||||
Sbjct 17513 TGCTTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAG 17572
Query 54836 TCCGGATG 54843
|| || ||
Sbjct 17573 TCGGGGTG 17580
>seq20
Length=61044
Score = 120 bits (132), Expect = 4e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190
||| || ||||| ||| ||| ||||||||||| | | || | ||||| || || ||
Sbjct 3542 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 3483
Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250
||| |||||||| ||||||||||| ||||||||||| ||||| ||||| || || || ||
Sbjct 3482 GAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 3423
Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAA 24279
|||||| || || || || || || ||||
Sbjct 3422 GAAAATACCCTCAACGGCGGCGAAAGCAA 3394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593683364328960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |