Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq430 111 2e-19
seq245 109 6e-19
seq768 86.0 7e-12
>seq430
Length=18842
Score = 111 bits (122), Expect = 2e-19
Identities = 157/214 (73%), Gaps = 10/214 (5%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||| |||| || |||||||| || || ||||| || | || ||||| |||| ||
Sbjct 6503 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCG 6562
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
||||||||||| || || || || ||||||||||||| || | || |||||| | | ||
Sbjct 6563 AGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTAT-CTTG 6621
Query 43095 ATTTTTTGT-TTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149
| | || | |||| ||| | | | |||||| ||| |||||| || | |||||| |
Sbjct 6622 AATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCT---TTCCACCTCCAACGTGATCG 6677
Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| ||||| || || ||||| || ||||| |||||
Sbjct 6678 TCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | |||||| || | || || |||||||| ||||||||
Sbjct 7270 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 7329
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || |||||||| || | || | || |||||||||| ||| || |||| |||
Sbjct 7330 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 7388
Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | ||||||||||| || || |||| |||||||| ||||| ||
Sbjct 7389 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 7437
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| ||||| || | ||| |||||||| || ||||| || | || || || |
Sbjct 6953 CGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCA 7012
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || ||||||||||||||||| || | |||||||| || | || | | |||||||
Sbjct 7013 TCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGGATACCCTCCTTG 7072
Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
||| ||| || || | | | | |||||||| ||||| || || | ||||||
Sbjct 7073 TCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACCTCAAGGGTGATG 7132
Query 43149 GTTTTGCCCGTTAGCGTCTTTAC 43171
|| || || || || ||||| ||
Sbjct 7133 GTCTTTCCAGTGAGGGTCTTGAC 7155
>seq245
Length=44002
Score = 109 bits (120), Expect = 6e-19
Identities = 135/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || | || || ||||||||||||||||| |
Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||||| || | || |||||||||| ||| || |||| ||| |
Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 3903
Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||||||| || || |||| || ||||| || ||||| || ||||| ||
Sbjct 3902 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3843
Query 43173 AA 43174
||
Sbjct 3842 AA 3841
>seq768
Length=20780
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| ||||| || | || |||||| || || ||||| || | ||||| || ||
Sbjct 8396 CGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCG 8455
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || ||||||||||||||||| || || ||||||||||||| || | | |||||||
Sbjct 8456 TCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTG 8515
Query 43089 TCCAT 43093
|| ||
Sbjct 8516 TCTAT 8520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571780774946560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |