Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq430 114 8e-21 seq768 98.7 6e-16 seq245 84.2 1e-11 >seq430 Length=18842 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||||||| | ||||| || ||||| ||||||||||| || Sbjct 6484 TCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGA 6543 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| || |||| || | |||||| || || || || || |||||||||||| || Sbjct 6544 GAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGG 6603 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||| || ||||| ||| | | | | |||| || | ||| || Sbjct 6604 GATGCCCTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCAC 6663 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| || ||||| ||||| || || || ||||||||||| Sbjct 6664 CTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||||||| Sbjct 7235 CCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 7294 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||||||||| ||||| || || |||||||| || ||| Sbjct 7295 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGG 7354 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | ||| |||| ||||| Sbjct 7355 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACC 7414 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 7415 TCGAGGGTGATGGTCTTGCCGGTGA 7439 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||| ||| | || ||| || || |||||||||||||| Sbjct 6941 CCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAG 7000 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| |||||| || ||||| || | |||||||| || || Sbjct 7001 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGG 7060 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | ||| | ||||| || Sbjct 7061 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACC 7120 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| || || ||||| || || || Sbjct 7121 TCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGAC 7155 >seq768 Length=20780 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||||||| | || || ||||| ||||||||||| || Sbjct 8384 CCACCACGCAGGCGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 8443 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| |||| |||||| || ||||| || || |||||||||||| ||| Sbjct 8444 AGAGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 8503 Query 34283 ACGCTCTCCTTGTC 34296 | | ||||||||| Sbjct 8504 ATTCCCTCCTTGTC 8517 >seq245 Length=44002 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| ||| | || || | |||||| || ||||| || Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || |||||||||||| ||| | || ||||||||| ||||| ||| | | | | Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 3900 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | ||| |||| || ||||| | || ||||| || || || || || || || || Sbjct 3899 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323051714309120