Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq430 116 3e-21 seq245 87.8 1e-12 >seq430 Length=18842 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||||| ||||||||||| || || |||| || Sbjct 6503 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCG 6562 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||| ||||||||||| | |||||||| || | Sbjct 6563 AGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGA 6622 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| | |||||||||| || ||||||||| Sbjct 6623 ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAACGTGATCGTCTTG 6682 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 6683 CCAGTGAGGGTCTTGACGAAGATCTGCAT 6711 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||| || || |||||||| ||| ||| ||| | || |||| || || ||||| || Sbjct 6748 CTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAA 6807 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||| ||||| ||||||||||| | |||||||| || || || ||| || Sbjct 6808 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTT 6867 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| || ||||||||||| || ||||| || || || |||||||| || Sbjct 6868 ATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGAC 6927 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 6928 GAAGATTTGCAT 6939 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| |||||| ||||| || |||||||||||| || |||| | || ||| Sbjct 6959 ACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCC 7018 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| ||||| ||||| || || ||||| | ||||||||||||| Sbjct 7019 AGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGGATACCCTCCTTGTCC 7075 >seq245 Length=44002 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| ||| | || || || || || || ||||| | Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 | | ||||| |||||||| || | |||||||||||| || || ||| || Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3902 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 3901 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3842 Query 45327 A 45327 | Sbjct 3841 A 3841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395050393228192