Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq155 143 3e-29
seq20 120 4e-22
>seq155
Length=53423
Score = 143 bits (158), Expect = 3e-29
Identities = 585/905 (65%), Gaps = 24/905 (3%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|| ||||||||||| | |||| | ||| || ||| || | || || | | | |
Sbjct 16688 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 16747
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307
|| || |||| ||| || || ||||| || || || ||| |||| ||||| ||| ||
Sbjct 16748 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 16806
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 63364
||||| | | ||| ||| || || || | |||||| ||||| | ||| |
Sbjct 16807 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 16863
Query 63365 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63424
| | ||| || ||||| || |||| || || || | | | || || || ||||| ||
Sbjct 16864 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGCTTGTTGCC 16923
Query 63425 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 63484
||||| || | || | ||| ||||| || | || | | ||| |||| ||||||||
Sbjct 16924 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 16983
Query 63485 TGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-A 63543
|| ||| ||||| ||| || ||| ||| | ||||| || | | | | | |
Sbjct 16984 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 17042
Query 63544 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGC 63603
|||| || || || || | || ||||| | || ||| || | |||||||| || |
Sbjct 17043 GACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 17102
Query 63604 CTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC-ATTTGGTGACGAGTA 63662
| || ||||| || || |||| | | || || || | || | | || | | | |
Sbjct 17103 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCAAGCTGAGGCTGGGGA 17161
Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722
||||| ||||| || | ||| || ||||| ||||| || |||| | || | | |
Sbjct 17162 GTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAGTGA 17221
Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782
|| ||||| || || || |||||| | ||| || || || || |||||||| | |
Sbjct 17222 TAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATCAGC 17281
Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842
| |||||||| | ||| ||| || | || || || ||| ||| ||| |
Sbjct 17282 AGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACGATCGTTCGAGG 17341
Query 63843 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGA 63900
|| || || ||||| ||||||| ||||| || || || || | ||| |||| ||||
Sbjct 17342 GTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGTTGA 17399
Query 63901 GCTTATCCTTATATTTGTTAACTATATC-CATGGTAATACTT-GAAATAATCGGAGAATG 63958
| | ||| ||| || ||||| | || ||| | | ||| || || ||||| | |
Sbjct 17400 GTTCATCAGCATACTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGCTGG 17457
Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT--AAATAGt 64016
||| |||||| || || || |||| | | | || || || || | ||| |
Sbjct 17458 CTTCTTATTTTTCGGGTTTACGTAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAATTGC 17515
Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076
|| || || | |||||| || || || | ||| || | || || || |||||||| ||
Sbjct 17516 TTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAGTCG 17575
Query 64077 GGATG 64081
|| ||
Sbjct 17576 GGGTG 17580
>seq20
Length=61044
Score = 120 bits (132), Expect = 4e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637
||| || ||||| ||| ||| ||||||||||| | | || | ||||| || || ||
Sbjct 3542 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 3483
Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697
||| |||||||| ||||||||||| ||||||||||| |||||||| || || ||||| ||
Sbjct 3482 GAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 3423
Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
||| || || || || || || || ||||
Sbjct 3422 GAAAATACCCTCAACGGCGGCGAAAGCAA 3394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629777039746560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |