Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq155 143 3e-29 seq20 120 4e-22 >seq155 Length=53423 Score = 143 bits (158), Expect = 3e-29 Identities = 585/905 (65%), Gaps = 24/905 (3%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || ||||||||||| | |||| | ||| || ||| || | || || | | | | Sbjct 16688 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 16747 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 16748 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 16806 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 63364 ||||| | | ||| ||| || || || | |||||| ||||| | ||| | Sbjct 16807 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 16863 Query 63365 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63424 | | ||| || ||||| || |||| || || || | | | || || || ||||| || Sbjct 16864 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGCTTGTTGCC 16923 Query 63425 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 63484 ||||| || | || | ||| ||||| || | || | | ||| |||| |||||||| Sbjct 16924 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 16983 Query 63485 TGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-A 63543 || ||| ||||| ||| || ||| ||| | ||||| || | | | | | | Sbjct 16984 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 17042 Query 63544 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGC 63603 |||| || || || || | || ||||| | || ||| || | |||||||| || | Sbjct 17043 GACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 17102 Query 63604 CTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC-ATTTGGTGACGAGTA 63662 | || ||||| || || |||| | | || || || | || | | || | | | | Sbjct 17103 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCAAGCTGAGGCTGGGGA 17161 Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 ||||| ||||| || | ||| || ||||| ||||| || |||| | || | | | Sbjct 17162 GTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAGTGA 17221 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || ||||| || || || |||||| | ||| || || || || |||||||| | | Sbjct 17222 TAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATCAGC 17281 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | |||||||| | ||| ||| || | || || || ||| ||| ||| | Sbjct 17282 AGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACGATCGTTCGAGG 17341 Query 63843 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGA 63900 || || || ||||| ||||||| ||||| || || || || | ||| |||| |||| Sbjct 17342 GTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGTTGA 17399 Query 63901 GCTTATCCTTATATTTGTTAACTATATC-CATGGTAATACTT-GAAATAATCGGAGAATG 63958 | | ||| ||| || ||||| | || ||| | | ||| || || ||||| | | Sbjct 17400 GTTCATCAGCATACTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGCTGG 17457 Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT--AAATAGt 64016 ||| |||||| || || || |||| | | | || || || || | ||| | Sbjct 17458 CTTCTTATTTTTCGGGTTTACGTAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAATTGC 17515 Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076 || || || | |||||| || || || | ||| || | || || || |||||||| || Sbjct 17516 TTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAGTCG 17575 Query 64077 GGATG 64081 || || Sbjct 17576 GGGTG 17580 >seq20 Length=61044 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 ||| || ||||| ||| ||| ||||||||||| | | || | ||||| || || || Sbjct 3542 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 3483 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 ||| |||||||| ||||||||||| ||||||||||| |||||||| || || ||||| || Sbjct 3482 GAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 3423 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 ||| || || || || || || || |||| Sbjct 3422 GAAAATACCCTCAACGGCGGCGAAAGCAA 3394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629777039746560