Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq155 141 1e-28
seq20 120 4e-22
>seq155
Length=53423
Score = 141 bits (156), Expect = 1e-28
Identities = 587/908 (65%), Gaps = 30/908 (3%)
Strand=Plus/Plus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
|| ||||||||||| | |||| | ||| ||| ||| || | || || | | | |
Sbjct 16688 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 16747
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
|| || |||| ||| || || ||||| || || || ||| |||| ||||| ||| |
Sbjct 16748 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 16806
Query 66102 AA-ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 66157
|| ||| | || ||| ||| || || || | |||||| ||||| | ||| |
Sbjct 16807 AAGATCACGGGCTCTCACTTCTTCCTTGCCG---TGGTTTTTACGGAGATCCAAGAATTC 16863
Query 66158 CATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 66217
| | ||| | ||||| || |||| || || || | | | || || || ||||| ||
Sbjct 16864 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGCTTGTTGCC 16923
Query 66218 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 66277
||||| || | || | ||| ||||| || | || | | ||| |||| ||||| ||
Sbjct 16924 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 16983
Query 66278 GGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-A 66336
||| | ||| ||||| ||| || ||| ||| | ||||| || | | | | | |
Sbjct 16984 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 17042
Query 66337 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 66396
|||| || || || || | || ||||| | || ||| || | || ||||| || |
Sbjct 17043 GACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 17102
Query 66397 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-- 66454
| || || || || ||| |||| | | || || || | || || | ||| | ||
Sbjct 17103 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCAA--GCTGAGG-CTGG 17158
Query 66455 --AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 66512
|||||| ||||| || | ||| || ||||| ||||| || |||| | || | |
Sbjct 17159 GGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAG 17218
Query 66513 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 66572
| || ||||| || || || |||||| | ||| || || || || ||||||||
Sbjct 17219 TGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATC 17278
Query 66573 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 66632
| || |||||||| | ||| | | ||| | || || || ||| ||| |||
Sbjct 17279 AGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACGATCGTTCG 17338
Query 66633 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690
| || || || ||||| ||||||| ||||| || || || || | ||| ||||||
Sbjct 17339 AGGGTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGT 17396
Query 66691 TGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATCGGAGA 66748
|||||| ||| ||| || ||||| || ||| | | ||| || || ||||| |
Sbjct 17397 TGAGTTCATCAGCATACTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGC 17454
Query 66749 ATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACT--AAAT 66806
| ||| |||||| || || || |||| | | | || || || || | |||
Sbjct 17455 TGGCTTCTTATTTTTCGGGTTTACGTAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAAT 17512
Query 66807 AGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAA 66866
| || || || | ||||| || || || ||||| || | || || | ||||||||
Sbjct 17513 TGCTTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAG 17572
Query 66867 TCCGGATG 66874
|| || ||
Sbjct 17573 TCGGGGTG 17580
>seq20
Length=61044
Score = 120 bits (132), Expect = 4e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213
||| || ||||| ||| ||| ||||||||||| | | || | ||||| || || ||
Sbjct 3542 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 3483
Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273
||| |||||||| ||||||||||| ||||||||||| ||||| ||||| || || || ||
Sbjct 3482 GAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 3423
Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAA 36302
|||||| || || || || || || ||||
Sbjct 3422 GAAAATACCCTCAACGGCGGCGAAAGCAA 3394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658130413671680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |