Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq235 131 1e-25
>seq235
Length=28033
Score = 131 bits (144), Expect = 1e-25
Identities = 289/431 (67%), Gaps = 28/431 (6%)
Strand=Plus/Plus
Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT-CAGGCC 20995
|||| | ||| || |||| ||| |||| || ||| ||| | ||||| | |||| |
Sbjct 22219 TGGTCGAGGTACACATGGGTGTCGCCCATGGAGTGGGTGAAGG-TGCCGGGATGCAGGTC 22277
Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055
|| | ||||||| | || || ||| || |||||||| ||||||||| || || | ||
Sbjct 22278 CGCGGCGTGAGCCAGCATATGCGTGAGCAGGGCGTACGAGGCGATGTTGAAGGGCAGGCC 22337
Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCC--GAGCC--- 21110
|||| | | ||| |||| | |||||||| ||||||| || | ||| |||||
Sbjct 22338 GAGGGCGGTATCGACGGAGCGCTGGTACATGAGGCAGGAGAGATGGCCCTTGGAGCCCGG 22397
Query 21111 ----------------ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCG 21154
||||| ||||| || | ||| || || || || ||||| |
Sbjct 22398 ACCGTCGGGGAAGGAGACGTAGAACTGGGCGAACATGTGGCAGGGCGGCAGGGCCATTAG 22457
Query 21155 CGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGT-GGGGCCGCCTGT 21213
| ||||| ||||||||||| |||| ||| | |||||| || |||| |||| | | |
Sbjct 22458 CTTAAGGTCGGCGGGGTTCCAAGCGCTCATGATGATGCGGCGGTCGTAGGGGTTGTGTTT 22517
Query 21214 TAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGG 21273
| | | | ||| |||| ||||||||| || ||||| ||| ||||| || || ||
Sbjct 22518 CAGCTTG-TGCACGACGTCCGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGTGTTGG 22576
Query 21274 CCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC 21333
| | ||| ||| || || || | ||||||||| ||||| || || || || ||||
Sbjct 22577 CGTCTACGTAGGGCGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGC 22636
Query 21334 ---CCTCGCGG 21341
||||||||
Sbjct 22637 CGACCTCGCGG 22647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427749139944960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |