Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq235 131 1e-25 >seq235 Length=28033 Score = 131 bits (144), Expect = 1e-25 Identities = 289/431 (67%), Gaps = 28/431 (6%) Strand=Plus/Plus Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT-CAGGCC 20995 |||| | ||| || |||| ||| |||| || ||| ||| | ||||| | |||| | Sbjct 22219 TGGTCGAGGTACACATGGGTGTCGCCCATGGAGTGGGTGAAGG-TGCCGGGATGCAGGTC 22277 Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055 || | ||||||| | || || ||| || |||||||| ||||||||| || || | || Sbjct 22278 CGCGGCGTGAGCCAGCATATGCGTGAGCAGGGCGTACGAGGCGATGTTGAAGGGCAGGCC 22337 Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCC--GAGCC--- 21110 |||| | | ||| |||| | |||||||| ||||||| || | ||| ||||| Sbjct 22338 GAGGGCGGTATCGACGGAGCGCTGGTACATGAGGCAGGAGAGATGGCCCTTGGAGCCCGG 22397 Query 21111 ----------------ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCG 21154 ||||| ||||| || | ||| || || || || ||||| | Sbjct 22398 ACCGTCGGGGAAGGAGACGTAGAACTGGGCGAACATGTGGCAGGGCGGCAGGGCCATTAG 22457 Query 21155 CGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGT-GGGGCCGCCTGT 21213 | ||||| ||||||||||| |||| ||| | |||||| || |||| |||| | | | Sbjct 22458 CTTAAGGTCGGCGGGGTTCCAAGCGCTCATGATGATGCGGCGGTCGTAGGGGTTGTGTTT 22517 Query 21214 TAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGG 21273 | | | | ||| |||| ||||||||| || ||||| ||| ||||| || || || Sbjct 22518 CAGCTTG-TGCACGACGTCCGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGTGTTGG 22576 Query 21274 CCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC 21333 | | ||| ||| || || || | ||||||||| ||||| || || || || |||| Sbjct 22577 CGTCTACGTAGGGCGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGC 22636 Query 21334 ---CCTCGCGG 21341 |||||||| Sbjct 22637 CGACCTCGCGG 22647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427749139944960