Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq430 84.2 2e-11 >seq430 Length=18842 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||| ||||| | ||||||||||||| || || | || ||||| || || |||||||| Sbjct 6748 CTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAA 6807 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATC-AACTCTTTGACTC 43036 ||||| ||||| || |||| || | || || || || |||| ||| || || Sbjct 6808 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTC-TTCACGT 6866 Query 43037 TGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096 | | | ||||| | ||| || || | ||| || ||||||||||| ||||| || | Sbjct 6867 TATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGA 6926 Query 43097 CAAAAATTTGCAT 43109 | || |||||||| Sbjct 6927 CGAAGATTTGCAT 6939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381345653802816