Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq155 163 4e-35
seq20 107 3e-18
>seq155
Length=53423
Score = 163 bits (180), Expect = 4e-35
Identities = 592/908 (65%), Gaps = 30/908 (3%)
Strand=Plus/Plus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
|| ||||||||||| | ||| | | | ||| ||| || || || || | | | |
Sbjct 16688 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 16747
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 72062
|| || || | | | || || ||||| || || || ||| |||| ||||| ||| ||
Sbjct 16748 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 16806
Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 72119
||||| | || ||| || || || || | |||||| ||||| | ||| |
Sbjct 16807 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 16863
Query 72120 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCC 72179
| | ||| || ||||| || |||| || || || | | | ||||| || ||||| ||
Sbjct 16864 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGCTTGTTGCC 16923
Query 72180 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 72239
||||| || | || | ||| ||||| || | || | | ||| |||| ||||| ||
Sbjct 16924 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 16983
Query 72240 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT-A 72298
||| | ||| ||||| ||| || ||| ||| | ||||| || | | | | | | |
Sbjct 16984 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 17042
Query 72299 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 72358
|||| || || || || | || ||||| | || ||| || | || ||||| || |
Sbjct 17043 GACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 17102
Query 72359 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-- 72416
| || || || || ||| |||| | | || || || | || || | ||| | ||
Sbjct 17103 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCA--AGCTGA-GGCTGG 17158
Query 72417 --AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474
|||||| ||||| || | ||| || ||||| ||||| || |||| | |||| |
Sbjct 17159 GGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAG 17218
Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534
| || ||||| || || || |||||| | ||| || || || || ||||||||
Sbjct 17219 TGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATC 17278
Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCC 72594
| || ||||||||| | ||| | | ||| || || || || ||| ||| |||
Sbjct 17279 AGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACGATCGTTCG 17338
Query 72595 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652
| || || || ||||| ||||||| ||||| || || || || | ||| |||| |
Sbjct 17339 AGGGTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGT 17396
Query 72653 TGAGTTTATCCTTATATTTGTTAACTATATC-CATGGTGATACTT-GAAATAATCGGAGA 72710
|||||| ||| ||| || ||||| | || ||| | | ||| || || ||||| |
Sbjct 17397 TGAGTTCATCAGCATACTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGC 17454
Query 72711 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT--AAAT 72768
| ||| |||||| || || || |||| | | | || || || || | |||
Sbjct 17455 TGGCTTCTTATTTTTCGGGTTTACGTAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAAT 17512
Query 72769 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 72828
| || || || | |||||| || || || ||||| || | || || || ||||||||
Sbjct 17513 TGCTTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAG 17572
Query 72829 TCTGGATG 72836
|| || ||
Sbjct 17573 TCGGGGTG 17580
Score = 87.8 bits (96), Expect = 2e-12
Identities = 196/291 (67%), Gaps = 5/291 (2%)
Strand=Plus/Plus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||||| || ||||| ||||||| ||| ||||| | || || || |||||||||
Sbjct 15465 TCCTGGTCCACCGTGAACTGGATGGGAGCGGAGGCGGCCATGGTCCGCAGGTAGTACATG 15524
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908
|| || || || || | |||| || ||| ||||| || || | ||| | |
Sbjct 15525 CCGGTCTTCAGGCCCATCTTCCAGCCCGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 15584
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
|| || | ||| || || | |||||| ||||| ||| |||| |||| ||| ||
Sbjct 15585 GGCTCCTTCAGGTGGATGTTGAGCGACTGGGACTGATCAATGTAGGCACCCCGGTCGGCC 15644
Query 70969 GCCATTTTTATGAT-CGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 71027
||||| | | || | || ||| | ||| ||||| | || || || | | ||| ||
Sbjct 15645 GCCATCTGCAGAATACCTC-GTTGGGAAATCTCCCACACGGTCTTGTACAGGCTCTTGAT 15703
Query 71028 ATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075
||| | || | ||| | | ||||| | ||||||||||| ||||| ||
Sbjct 15704 GTCTGCGGGGATGTTGGGGATGTTCTGGACCGATCCACCATCCGCAATGAT 15754
>seq20
Length=61044
Score = 107 bits (118), Expect = 3e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120
||| || ||||| ||| ||| |||||||| || | | || | ||||| || || ||
Sbjct 3542 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 3483
Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180
||| |||||||| ||||||||||| ||||||||||| || || ||||| || || || ||
Sbjct 3482 GAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 3423
Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAA 42209
||| || || || || || || || ||||
Sbjct 3422 GAAAATACCCTCAACGGCGGCGAAAGCAA 3394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671095978635520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |