Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq155 163 4e-35 seq20 107 3e-18 >seq155 Length=53423 Score = 163 bits (180), Expect = 4e-35 Identities = 592/908 (65%), Gaps = 30/908 (3%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || ||||||||||| | ||| | | | ||| ||| || || || || | | | | Sbjct 16688 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 16747 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 72062 || || || | | | || || ||||| || || || ||| |||| ||||| ||| || Sbjct 16748 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 16806 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 72119 ||||| | || ||| || || || || | |||||| ||||| | ||| | Sbjct 16807 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 16863 Query 72120 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCC 72179 | | ||| || ||||| || |||| || || || | | | ||||| || ||||| || Sbjct 16864 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGCTTGTTGCC 16923 Query 72180 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 72239 ||||| || | || | ||| ||||| || | || | | ||| |||| ||||| || Sbjct 16924 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 16983 Query 72240 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT-A 72298 ||| | ||| ||||| ||| || ||| ||| | ||||| || | | | | | | | Sbjct 16984 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 17042 Query 72299 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 72358 |||| || || || || | || ||||| | || ||| || | || ||||| || | Sbjct 17043 GACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 17102 Query 72359 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-- 72416 | || || || || ||| |||| | | || || || | || || | ||| | || Sbjct 17103 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCA--AGCTGA-GGCTGG 17158 Query 72417 --AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474 |||||| ||||| || | ||| || ||||| ||||| || |||| | |||| | Sbjct 17159 GGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAG 17218 Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534 | || ||||| || || || |||||| | ||| || || || || |||||||| Sbjct 17219 TGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATC 17278 Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCC 72594 | || ||||||||| | ||| | | ||| || || || || ||| ||| ||| Sbjct 17279 AGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACGATCGTTCG 17338 Query 72595 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652 | || || || ||||| ||||||| ||||| || || || || | ||| |||| | Sbjct 17339 AGGGTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGT 17396 Query 72653 TGAGTTTATCCTTATATTTGTTAACTATATC-CATGGTGATACTT-GAAATAATCGGAGA 72710 |||||| ||| ||| || ||||| | || ||| | | ||| || || ||||| | Sbjct 17397 TGAGTTCATCAGCATACTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGC 17454 Query 72711 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT--AAAT 72768 | ||| |||||| || || || |||| | | | || || || || | ||| Sbjct 17455 TGGCTTCTTATTTTTCGGGTTTACGTAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAAT 17512 Query 72769 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 72828 | || || || | |||||| || || || ||||| || | || || || |||||||| Sbjct 17513 TGCTTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAG 17572 Query 72829 TCTGGATG 72836 || || || Sbjct 17573 TCGGGGTG 17580 Score = 87.8 bits (96), Expect = 2e-12 Identities = 196/291 (67%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||||| || ||||| ||||||| ||| ||||| | || || || ||||||||| Sbjct 15465 TCCTGGTCCACCGTGAACTGGATGGGAGCGGAGGCGGCCATGGTCCGCAGGTAGTACATG 15524 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908 || || || || || | |||| || ||| ||||| || || | ||| | | Sbjct 15525 CCGGTCTTCAGGCCCATCTTCCAGCCCGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 15584 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 || || | ||| || || | |||||| ||||| ||| |||| |||| ||| || Sbjct 15585 GGCTCCTTCAGGTGGATGTTGAGCGACTGGGACTGATCAATGTAGGCACCCCGGTCGGCC 15644 Query 70969 GCCATTTTTATGAT-CGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 71027 ||||| | | || | || ||| | ||| ||||| | || || || | | ||| || Sbjct 15645 GCCATCTGCAGAATACCTC-GTTGGGAAATCTCCCACACGGTCTTGTACAGGCTCTTGAT 15703 Query 71028 ATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075 ||| | || | ||| | | ||||| | ||||||||||| ||||| || Sbjct 15704 GTCTGCGGGGATGTTGGGGATGTTCTGGACCGATCCACCATCCGCAATGAT 15754 >seq20 Length=61044 Score = 107 bits (118), Expect = 3e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 ||| || ||||| ||| ||| |||||||| || | | || | ||||| || || || Sbjct 3542 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 3483 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||| |||||||| ||||||||||| ||||||||||| || || ||||| || || || || Sbjct 3482 GAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 3423 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 ||| || || || || || || || |||| Sbjct 3422 GAAAATACCCTCAACGGCGGCGAAAGCAA 3394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671095978635520