Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq430 109 1e-18
seq20 98.7 2e-15
>seq430
Length=18842
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || ||||| || || || | ||| || || || || || |||
Sbjct 6971 GTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTACCA 7030
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| ||||||||||| || || || || ||||| ||||| | ||
Sbjct 7031 GCGAAGATCAAACGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTC 7090
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||||| | ||| ||||| || || || ||||| ||||| || ||
Sbjct 7091 ACATTGTCGATGGTGTCGCTGGATTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTC 7150
Query 104543 TTTAC 104547
|| ||
Sbjct 7151 TTGAC 7155
>seq20
Length=61044
Score = 98.7 bits (108), Expect = 2e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|||||||| ||||| || || ||||| ||||| || ||||||||||| | |||||||||
Sbjct 3393 GTTGCTTTCGCCGCCGTTGAGGGTATTTTCTTCTCCGGGTCTTTTGCTTCCATCTTTTGG 3452
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
| ||||| | ||||| ||||| || | || ||||| ||||| | || | |||
Sbjct 3453 CTTAAGAAGCGTGGCCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGAC 3512
Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTT 269286
|| ||| | ||| ||||||||| || ||
Sbjct 3513 GAGGGTCTCCACACCGACTTCGCCTGCTT 3541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151322396191616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |