Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq441 172 9e-39
seq84 168 1e-37
>seq441
Length=18409
Score = 172 bits (190), Expect = 9e-39
Identities = 188/247 (76%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || |||||||| || ||||||||||| |||||
Sbjct 13856 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 13798
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || ||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 13797 CCGTCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 13738
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| |||||| || || |||| |||||| || ||| || ||
Sbjct 13737 CCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATGCCGTCACCTACACTGA 13678
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| ||||| ||| | || | ||||| || |||| || || ||
Sbjct 13677 GCACGCCAAGAGAAAGACCGTCACTTCCCTCGACGTTGTCTACGCTCTGAAGCGCCAGGG 13618
Query 16672 CCGTAAG 16678
|||| ||
Sbjct 13617 CCGTGAG 13611
>seq84
Length=40433
Score = 168 bits (186), Expect = 1e-37
Identities = 196/262 (75%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| || | ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 36183 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 36125
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| || |||||||| || ||||||||| |||| | || |||| |||||||
Sbjct 36124 TCCGTCGTCTTGCGCGTCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 36065
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| |||||| | |||| |||| ||| || || ||| || |
Sbjct 36064 CCCGCGGCGTGCTCAAGTCGTTCCTCGAATCCGTCATCCGTGACGCCGTCACCTACACTG 36005
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || |||||||| |||||||| |||| ||||||| || | || || || |
Sbjct 36004 AACACGCCAAGCGTAAGACCGTCACCTCGCTGGACGTCGTCTACGCCCTCAAGCGCCAGG 35945
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||||| | || ||||| ||
Sbjct 35944 GCCGTACCCTCTACGGTTTCGG 35923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79070489490336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |