Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq441 172 9e-39 seq84 168 1e-37 >seq441 Length=18409 Score = 172 bits (190), Expect = 9e-39 Identities = 188/247 (76%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || |||||||| || ||||||||||| ||||| Sbjct 13856 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 13798 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 13797 CCGTCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 13738 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| |||||| || || |||| |||||| || ||| || || Sbjct 13737 CCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATGCCGTCACCTACACTGA 13678 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| ||||| ||| | || | ||||| || |||| || || || Sbjct 13677 GCACGCCAAGAGAAAGACCGTCACTTCCCTCGACGTTGTCTACGCTCTGAAGCGCCAGGG 13618 Query 16672 CCGTAAG 16678 |||| || Sbjct 13617 CCGTGAG 13611 >seq84 Length=40433 Score = 168 bits (186), Expect = 1e-37 Identities = 196/262 (75%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | || || |||||||| || ||||||||||| |||| Sbjct 36183 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 36125 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| || |||||||| || ||||||||| |||| | || |||| ||||||| Sbjct 36124 TCCGTCGTCTTGCGCGTCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 36065 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| |||||| | |||| |||| ||| || || ||| || | Sbjct 36064 CCCGCGGCGTGCTCAAGTCGTTCCTCGAATCCGTCATCCGTGACGCCGTCACCTACACTG 36005 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || |||||||| |||||||| |||| ||||||| || | || || || | Sbjct 36004 AACACGCCAAGCGTAAGACCGTCACCTCGCTGGACGTCGTCTACGCCCTCAAGCGCCAGG 35945 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| || Sbjct 35944 GCCGTACCCTCTACGGTTTCGG 35923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070489490336