Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq155 168 8e-37 seq20 120 4e-22 >seq155 Length=53423 Score = 168 bits (186), Expect = 8e-37 Identities = 593/908 (65%), Gaps = 30/908 (3%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || ||||||||||| | |||| | ||| ||| ||| || | || || | | | | Sbjct 16688 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 16747 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || |||| ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 16748 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 16806 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 63313 ||||| | || ||| ||| || || || | |||||| ||||| | ||| | Sbjct 16807 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 16863 Query 63314 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63373 | | ||| || ||||| || |||| || || || | | | || || || ||||| || Sbjct 16864 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGCTTGTTGCC 16923 Query 63374 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 63433 ||||| || | || | ||| ||||| || | || | | ||| |||| |||||||| Sbjct 16924 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 16983 Query 63434 TGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-A 63492 || ||| ||||| ||| || ||| ||| | ||||| || | | | | | | Sbjct 16984 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 17042 Query 63493 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATAC 63552 |||| || || || || | || ||||| | || ||| || | |||||||| |||| Sbjct 17043 GACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 17102 Query 63553 CCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-- 63610 | || ||||| || || |||| | | || || || | || || | ||| | || Sbjct 17103 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCA--AGCTGA-GGCTGG 17158 Query 63611 --AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63668 |||||| ||||| || | ||| || ||||| ||||| || |||| | || | | Sbjct 17159 GGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAG 17218 Query 63669 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63728 | || ||||| || || || |||||| | ||| || || || || |||||||| Sbjct 17219 TGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATC 17278 Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788 | || |||||||| | ||| | | ||| | || || || ||| ||| ||| Sbjct 17279 AGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACGATCGTTCG 17338 Query 63789 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846 | || || || ||||| ||||||| ||||| || || || || | ||| |||||| Sbjct 17339 AGGGTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGT 17396 Query 63847 TGAGTTTATCCTTATATTTGTTAACTATATC-CATGGTGATACTT-GAAATAATCGGAGA 63904 |||||| ||| ||| || ||||| | || ||| | | ||| || || ||||| | Sbjct 17397 TGAGTTCATCAGCATACTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGC 17454 Query 63905 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT--AAAT 63962 | ||| |||||| || || || |||| | | | || || || || | ||| Sbjct 17455 TGGCTTCTTATTTTTCGGGTTTACGTAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAAT 17512 Query 63963 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 64022 | || || || | |||||| || || || ||||| || | || || || |||||||| Sbjct 17513 TGCTTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAG 17572 Query 64023 TCCGGATG 64030 || || || Sbjct 17573 TCGGGGTG 17580 >seq20 Length=61044 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || ||||| ||| ||| ||||||||||| | | || || ||||| || || || Sbjct 3542 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 3483 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| |||||||| ||||||||||| ||||||||||| |||||||| || || || || || Sbjct 3482 GAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 3423 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 ||| || || || || || || || |||| Sbjct 3422 GAAAATACCCTCAACGGCGGCGAAAGCAA 3394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622907082200320