Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq430 116 3e-21 seq245 116 3e-21 seq155 116 3e-21 seq768 102 8e-17 seq20 89.7 5e-13 >seq430 Length=18842 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || || | || | ||| |||||||| || |||||||| ||| Sbjct 7234 GCCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 7293 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || || Sbjct 7294 CAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGG 7353 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || ||| | ||||||| Sbjct 7354 GATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGAC 7413 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || ||||| Sbjct 7414 CTCGAGGGTGATGGTCTTGCCGGT 7437 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || || || | || || |||||||| |||||||| ||| Sbjct 6941 CCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAG 7000 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| ||||||||||| || |||||| Sbjct 7001 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGG 7060 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || ||| |||| || | Sbjct 7061 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACC 7120 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || || || || || || |||| Sbjct 7121 TCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGA 7157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || ||||| ||||| |||||||||||| | Sbjct 6713 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 6772 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | |||||| || || |||| |||||||||||||| |||||| Sbjct 6773 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGG 6832 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | || | || || | ||| | Sbjct 6833 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACC 6892 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| ||||| ||||| || ||||| || ||||| Sbjct 6893 TCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939 >seq245 Length=44002 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||| || || || || || ||||| ||| || ||||| | | Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3902 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||| | ||||| ||||| ||| ||||| || || || || |||| Sbjct 3901 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3842 Query 131225 AA 131226 || Sbjct 3841 AA 3840 >seq155 Length=53423 Score = 116 bits (128), Expect = 3e-21 Identities = 166/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| ||||| ||||||||| | || | ||| |||||| |||| Sbjct 15816 TTGACGACCTGGAACTCGCCCGCCAAAACACGACGCGAGTAGATGTTCGACGTGTAGGGC 15875 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||||||| ||| || | || || |||||| |||||| Sbjct 15876 TCGAAGCACTCGTTGAAGCCCAGGATCTGACTCGTGCTGGCCGTCGGCATGGGTGCCACC 15935 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || || |||| |||| || | ||| | |||| || ||| |||| |||| Sbjct 15936 AGCAGACTG--TTACGCACGCCGGTCTGCGCGATCTTGGCCTTGAGAGTATCCCAGTCCC 15993 Query 145236 ATAGCGAAGTCGGCCTCACG-TCCCACATGTCGTACTGCAAAATGCCCT 145283 | || || || | ||| ||||||||||| ||||| | ||| |||| Sbjct 15994 AGAGATCGGTGGGGGT-ACGATCCCACATGTCATACTGGAGAATACCCT 16041 >seq768 Length=20780 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| | || | |||||||||||| || |||||||| || Sbjct 8384 CCACCACGCAGGCGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 8443 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| | |||||||||||| || ||| Sbjct 8444 AGAGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 8503 Query 131128 ATTCCTTCTTTGTC 131141 ||||| || ||||| Sbjct 8504 ATTCCCTCCTTGTC 8517 >seq20 Length=61044 Score = 89.7 bits (98), Expect = 5e-13 Identities = 283/426 (66%), Gaps = 17/426 (4%) Strand=Plus/Plus Query 46177 GTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGC 46236 || ||||| | || || || || |||||| ||||||||| | || | ||| Sbjct 3408 GTTGAGGGTATTTTCTTCTCCGGGTCTTTTGCTTCCATCTTTTGGCTTAAGAAGCGTGGC 3467 Query 46237 ATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACG 46296 | |||||||| || || || |||||||| || || || |||||||| || || || Sbjct 3468 CTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACC 3527 Query 46297 GACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCG--ACACCG 46354 ||||| || || || | || | | ||| | | | |||| | || || | | | | Sbjct 3528 GACTTCGCCTG-CT-TGCTCTT-CTCTCACCT---CAACAACC--GCCCCAGCAAGAAAG 3579 Query 46355 TGCT-GAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCAC 46411 | | ||| ||| || ||||| || | || ||||||||||| || || | || | Sbjct 3580 TTGTCGAGGACATCATCGTTGAGGCTGTCTCAATCGAGAAGGAGTTCTTGACCGATGCCC 3639 Query 46412 TGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAG 46471 | ||| |||||| || ||||||||| | | |||||| | ||||||||||| || | Sbjct 3640 TCCCCTGTGCCCTCCTCGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTGG 3699 Query 46472 CGGACCGACTGCTCGTGCAGCT-TCACCAGC-CGAAGCATTTTCACGCGCGCAATCCATT 46529 | ||||| || || || ||| || || | ||||| | || | || ||| || || Sbjct 3700 CTGACCGTCTCCTGGT--CGCTCTCGGCAACGCGAAGTACTTCAATGCCACCAACCCCTT 3757 Query 46530 TGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGG 46589 || || ||| | ||||| |||| || || || || || ||||| ||||| ||||| Sbjct 3758 CGACTTCATGGAGTCGATCTCGCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGG 3817 Query 46590 CGAGTA 46595 || || Sbjct 3818 TGACTA 3823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471982402375680