Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq430 116 3e-21
seq245 116 3e-21
seq155 116 3e-21
seq768 102 8e-17
seq20 89.7 5e-13
>seq430
Length=18842
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||| | ||| || || | || | ||| |||||||| || |||||||| |||
Sbjct 7234 GCCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 7293
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || ||
Sbjct 7294 CAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGG 7353
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || ||| | |||||||
Sbjct 7354 GATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGAC 7413
Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || |||||
Sbjct 7414 CTCGAGGGTGATGGTCTTGCCGGT 7437
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || || || | || || |||||||| |||||||| |||
Sbjct 6941 CCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAG 7000
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || ||| |||| ||||||||||| || ||||||
Sbjct 7001 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGG 7060
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | || | || ||| |||| || |
Sbjct 7061 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACC 7120
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | ||| || || || || || || ||||
Sbjct 7121 TCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGA 7157
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || ||||| ||||| |||||||||||| |
Sbjct 6713 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 6772
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | |||||| || || |||| |||||||||||||| ||||||
Sbjct 6773 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGG 6832
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||| | | || | || || | ||| |
Sbjct 6833 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACC 6892
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||||| ||||| ||||| || ||||| || |||||
Sbjct 6893 TCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
>seq245
Length=44002
Score = 116 bits (128), Expect = 3e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||||||| |||||| ||||| |||||||| || ||| |||
Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||| || || || || || ||||| ||| || ||||| | |
Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3902
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || ||| | ||||| | ||||| ||||| ||| ||||| || || || || ||||
Sbjct 3901 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3842
Query 131225 AA 131226
||
Sbjct 3841 AA 3840
>seq155
Length=53423
Score = 116 bits (128), Expect = 3e-21
Identities = 166/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| ||||| ||||||||| | || | ||| |||||| ||||
Sbjct 15816 TTGACGACCTGGAACTCGCCCGCCAAAACACGACGCGAGTAGATGTTCGACGTGTAGGGC 15875
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||||||||| ||| || | || || |||||| ||||||
Sbjct 15876 TCGAAGCACTCGTTGAAGCCCAGGATCTGACTCGTGCTGGCCGTCGGCATGGGTGCCACC 15935
Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235
| | | || || |||| |||| || | ||| | |||| || ||| |||| ||||
Sbjct 15936 AGCAGACTG--TTACGCACGCCGGTCTGCGCGATCTTGGCCTTGAGAGTATCCCAGTCCC 15993
Query 145236 ATAGCGAAGTCGGCCTCACG-TCCCACATGTCGTACTGCAAAATGCCCT 145283
| || || || | ||| ||||||||||| ||||| | ||| ||||
Sbjct 15994 AGAGATCGGTGGGGGT-ACGATCCCACATGTCATACTGGAGAATACCCT 16041
>seq768
Length=20780
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||||| | || | |||||||||||| || |||||||| ||
Sbjct 8384 CCACCACGCAGGCGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 8443
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| |||| | |||||||||||| || |||
Sbjct 8444 AGAGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 8503
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 8504 ATTCCCTCCTTGTC 8517
>seq20
Length=61044
Score = 89.7 bits (98), Expect = 5e-13
Identities = 283/426 (66%), Gaps = 17/426 (4%)
Strand=Plus/Plus
Query 46177 GTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGC 46236
|| ||||| | || || || || |||||| ||||||||| | || | |||
Sbjct 3408 GTTGAGGGTATTTTCTTCTCCGGGTCTTTTGCTTCCATCTTTTGGCTTAAGAAGCGTGGC 3467
Query 46237 ATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACG 46296
| |||||||| || || || |||||||| || || || |||||||| || || ||
Sbjct 3468 CTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACC 3527
Query 46297 GACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCG--ACACCG 46354
||||| || || || | || | | ||| | | | |||| | || || | | | |
Sbjct 3528 GACTTCGCCTG-CT-TGCTCTT-CTCTCACCT---CAACAACC--GCCCCAGCAAGAAAG 3579
Query 46355 TGCT-GAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCAC 46411
| | ||| ||| || ||||| || | || ||||||||||| || || | || |
Sbjct 3580 TTGTCGAGGACATCATCGTTGAGGCTGTCTCAATCGAGAAGGAGTTCTTGACCGATGCCC 3639
Query 46412 TGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAG 46471
| ||| |||||| || ||||||||| | | |||||| | ||||||||||| || |
Sbjct 3640 TCCCCTGTGCCCTCCTCGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTGG 3699
Query 46472 CGGACCGACTGCTCGTGCAGCT-TCACCAGC-CGAAGCATTTTCACGCGCGCAATCCATT 46529
| ||||| || || || ||| || || | ||||| | || | || ||| || ||
Sbjct 3700 CTGACCGTCTCCTGGT--CGCTCTCGGCAACGCGAAGTACTTCAATGCCACCAACCCCTT 3757
Query 46530 TGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGG 46589
|| || ||| | ||||| |||| || || || || || ||||| ||||| |||||
Sbjct 3758 CGACTTCATGGAGTCGATCTCGCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGG 3817
Query 46590 CGAGTA 46595
|| ||
Sbjct 3818 TGACTA 3823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471982402375680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |