Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq965 136 3e-27 seq353 116 2e-21 >seq965 Length=16247 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct 5830 AAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5771 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5770 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5736 >seq353 Length=22297 Score = 116 bits (128), Expect = 2e-21 Identities = 203/293 (69%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 |||||||||||||||||| |||| |||| ||||| ||||||| ||||| ||||||| Sbjct 5722 TTCTACCGCTACAAAATGGAGCGC--CTGCAGTCCAAGATCGAGGGCAAGGGCAACGGTA 5665 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314 | || || ||| | || || |||||| || || | | ||| | || ||| | Sbjct 5664 TCAAGACTGTCGTCGTGAA----CCTGAACTCTGTGGCCCAATCACTCAGTCGTCCTCCG 5609 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 ||||| || || |||||||| | |||||||| |||||| | | | | || Sbjct 5608 TCCTACGTGATCAAGTATTTCGGTTTTGAACTTGGTGCTCAGGCCAACGCCAAGCCCACT 5549 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 | || || | ||| | || || | ||| || |||||||||| || |||| |||||| Sbjct 5548 GATGATCGTTGGATCATCAATGGTGCCCATGACGCTGCCAAGCTCCAAGACTACCTTGAC 5489 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || || ||| ||||||||| || || | | ||| | ||||| || ||||| Sbjct 5488 GGATTCATTTCCAAGTTTGTTCTTTGCAAGAAGTGCAAGAACCCCGAAACCGA 5436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334926168665312