Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq965 136 3e-27
seq353 116 2e-21
>seq965
Length=16247
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 5830 AAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5771
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 5770 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5736
>seq353
Length=22297
Score = 116 bits (128), Expect = 2e-21
Identities = 203/293 (69%), Gaps = 12/293 (4%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
|||||||||||||||||| |||| |||| ||||| ||||||| ||||| |||||||
Sbjct 5722 TTCTACCGCTACAAAATGGAGCGC--CTGCAGTCCAAGATCGAGGGCAAGGGCAACGGTA 5665
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314
| || || ||| | || || |||||| || || | | ||| | || ||| |
Sbjct 5664 TCAAGACTGTCGTCGTGAA----CCTGAACTCTGTGGCCCAATCACTCAGTCGTCCTCCG 5609
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
||||| || || |||||||| | |||||||| |||||| | | | | ||
Sbjct 5608 TCCTACGTGATCAAGTATTTCGGTTTTGAACTTGGTGCTCAGGCCAACGCCAAGCCCACT 5549
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
| || || | ||| | || || | ||| || |||||||||| || |||| ||||||
Sbjct 5548 GATGATCGTTGGATCATCAATGGTGCCCATGACGCTGCCAAGCTCCAAGACTACCTTGAC 5489
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| || ||| ||||||||| || || | | ||| | ||||| || |||||
Sbjct 5488 GGATTCATTTCCAAGTTTGTTCTTTGCAAGAAGTGCAAGAACCCCGAAACCGA 5436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334926168665312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |