Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq20 96.9 4e-15
>seq20
Length=61044
Score = 96.9 bits (106), Expect = 4e-15
Identities = 194/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||| |||||||| | || || || |||| || |||| ||||| || || |||
Sbjct 3202 ATGTAGGTATCGATCAGAAGGGAGTAGGTTTCCGAGTGGATGTTCTCGATCATGATCTGG 3143
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| ||||||||||| | ||| || | || ||| || ||| |||| ||| | ||
Sbjct 3142 AACCCGTAGAAACAACGAGCCTCGGGGACCTGAACCTCTCCGCTGAATCGCTCCAGCAGG 3083
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| |||||||| || ||||| || || || || ||||||| | | || || |
Sbjct 3082 TTCTCATTGACAATGCCATCTGAGGCGGCGAAGAAAGCCAGAACGCGAGAGATGAAGTAG 3023
Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598
||| || || || | | || | ||||||| | ||| || || ||||||| |||
Sbjct 3022 CGCTCGTCGTCGTTCAGGCGGTTGTTCCAATCGTGCAAATCCTTCGACAGATCGATTTCC 2963
Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
|| | ||||| || || || || || || |||||||| | ||| ||
Sbjct 2962 TCAGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 2916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556824938164480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |