Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq20 96.9 4e-15 >seq20 Length=61044 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| |||||||| | || || || |||| || |||| ||||| || || ||| Sbjct 3202 ATGTAGGTATCGATCAGAAGGGAGTAGGTTTCCGAGTGGATGTTCTCGATCATGATCTGG 3143 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || ||||||||||| | ||| || | || ||| || ||| |||| ||| | || Sbjct 3142 AACCCGTAGAAACAACGAGCCTCGGGGACCTGAACCTCTCCGCTGAATCGCTCCAGCAGG 3083 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| || ||||| || || || || ||||||| | | || || | Sbjct 3082 TTCTCATTGACAATGCCATCTGAGGCGGCGAAGAAAGCCAGAACGCGAGAGATGAAGTAG 3023 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| || || || | | || | ||||||| | ||| || || ||||||| ||| Sbjct 3022 CGCTCGTCGTCGTTCAGGCGGTTGTTCCAATCGTGCAAATCCTTCGACAGATCGATTTCC 2963 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || | ||||| || || || || || || |||||||| | ||| || Sbjct 2962 TCAGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 2916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556824938164480