Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq430 125 6e-24
seq245 86.0 5e-12
>seq430
Length=18842
Score = 125 bits (138), Expect = 6e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | ||||| |||||| |||| || || ||||| | |
Sbjct 6939 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAAACGATCACGCTGGAGGTGGAGAGTTCA 6880
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || ||||| |||||||| || || ||||| ||
Sbjct 6879 GACACCATCGATAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCCGACCAG 6820
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || |||||||| || ||||| |||||| |||||| | ||||||||||||
Sbjct 6819 CAGCGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGTCCGATTACAAC 6760
Query 22399 ATTCAAAAAGAATCCAC 22415
|| |||||||| || ||
Sbjct 6759 ATCCAAAAAGAGTCTAC 6743
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || ||| ||| ||| ||| | ||| || | ||
Sbjct 7143 ACTGGAAAGACCATCACCCTTGAGGTTGAATCCAGCGACACCATCGACAATGTGAAGTCG 7084
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||||||||| || || ||||| || ||| | || || || || ||
Sbjct 7083 AAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGTTTGATCTTCGCTGGTAAG 7024
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| |||||| ||||||| |||||||| ||||| |||||||| | ||
Sbjct 7023 CAGCTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAAAAGGAATCCACGCTCCAC 6964
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||| |||| |||| || |||
Sbjct 6963 TTGGTTCTGCGCCTGCGTGGTGGT 6940
Score = 93.3 bits (102), Expect = 4e-14
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || || || | | ||| ||| | ||| | ||||
Sbjct 7437 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTCAAGAGC 7378
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || || ||||| || ||||| || || || |||||
Sbjct 7377 AAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAGCAGCGTCTGATCTTCGCTGGCAAG 7318
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | |||||| ||||| | ||||| |||||||| || || || ||||||
Sbjct 7317 CAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCCACC 7264
>seq245
Length=44002
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 3840 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 3899
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || || ||||||||||| ||||| ||||| || || |||||
Sbjct 3900 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCT 3959
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| || || || || ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 3960 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 4019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419701645278880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |