Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq430 125 6e-24 seq245 86.0 5e-12 >seq430 Length=18842 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| |||||| |||| || || ||||| | | Sbjct 6939 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAAACGATCACGCTGGAGGTGGAGAGTTCA 6880 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || ||||| |||||||| || || ||||| || Sbjct 6879 GACACCATCGATAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCCGACCAG 6820 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || |||||||| || ||||| |||||| |||||| | |||||||||||| Sbjct 6819 CAGCGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGTCCGATTACAAC 6760 Query 22399 ATTCAAAAAGAATCCAC 22415 || |||||||| || || Sbjct 6759 ATCCAAAAAGAGTCTAC 6743 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || ||| ||| ||| ||| | ||| || | || Sbjct 7143 ACTGGAAAGACCATCACCCTTGAGGTTGAATCCAGCGACACCATCGACAATGTGAAGTCG 7084 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || ||||| || ||| | || || || || || Sbjct 7083 AAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGTTTGATCTTCGCTGGTAAG 7024 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| |||||| ||||||| |||||||| ||||| |||||||| | || Sbjct 7023 CAGCTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAAAAGGAATCCACGCTCCAC 6964 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| |||| |||| || ||| Sbjct 6963 TTGGTTCTGCGCCTGCGTGGTGGT 6940 Score = 93.3 bits (102), Expect = 4e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || | | ||| ||| | ||| | |||| Sbjct 7437 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTCAAGAGC 7378 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || ||||| || ||||| || || || ||||| Sbjct 7377 AAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAGCAGCGTCTGATCTTCGCTGGCAAG 7318 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | |||||| ||||| | ||||| |||||||| || || || |||||| Sbjct 7317 CAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCCACC 7264 >seq245 Length=44002 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 3840 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 3899 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| ||||| ||||| || || ||||| Sbjct 3900 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCT 3959 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| || || || || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 3960 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 4019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419701645278880