Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq20 118 2e-21 seq923 104 5e-17 >seq20 Length=61044 Score = 118 bits (130), Expect = 2e-21 Identities = 273/404 (68%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||||||||||||||| ||| Sbjct 3805 TCGAAGAAGTTGGTCTTACCAGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 3746 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||| | | ||| | | ||| || || || | || ||||| ||||| ||||| | Sbjct 3745 GCATTGAAGTACTTCGCGTTGCCGAGAGCGACCAGGAGACGGTCAGCCACGAACTCGATG 3686 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||| | | ||| || | || || | | Sbjct 3685 TACTGGCACATCAGGTTGGAGTTCATGCCGAGGAGGGCACAGGGGAGGGCATCGGTCAAG 3626 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC----CTGTGCCAGAGA 251798 || ||||| ||| | | || ||||| | | || ||| || | | | | | Sbjct 3625 AACTCCTTCTCGATTGAGACAGCCTCAACGATGATGTCCTCGACAACTTTCTTGCTGGGG 3566 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 | | ||||| || | ||| | || ||| || || | | ||| |||||||||| Sbjct 3565 C-GGTTGTT---GAGGTGAGAGAAGAGCAAGCAGGCGAAGTCGGT-GTGGAGACCCTCGT 3511 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | ||| ||||| |||||| || | || || ||||||| ||||| ||| | |||| Sbjct 3510 CACGAGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGGCCACGCTTCTTAAGCC 3451 Query 251918 AGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 | ||||| | |||||| || || ||||| | | |||||| || Sbjct 3450 AAAAGATGGAAGCAAAA-GACCCGGAGAAGAAAATACCCTCAAC 3408 >seq923 Length=9260 Score = 104 bits (114), Expect = 5e-17 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 280649 CAAGAATGTTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACT 280707 |||| | |||||| ||| | || || | | |||||||| ||||| | |||||| Sbjct 4049 CAAGGAGATTGAGGCCCACTGCGAGCA-GTTCGGTCTGGATGCCGAGCTGGTCTCTCACT 4107 Query 280708 CTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTG 280766 | || || |||||||| || || || ||| ||||| | || ||| || |||| | Sbjct 4108 CGCGTATGCGCGGTCTCTCCGGTGGTCAGCGTGTCAAGGTCGTGCTCGCCGCCTGCTC-G 4166 Query 280767 TGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGC 280826 ||||| | ||||||||||||||| |||||||| || |||||||| |||||||| || | Sbjct 4167 TGGCAGCGCCCTCACGTGATCGTCCTCGACGAACCCACCAACTACCTGGACCGTGACTCC 4226 Query 280827 CTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTCTCAC 280886 || || |||||| |||||| | | || | || || || || ||||| ||||| Sbjct 4227 CTTGGTGCTCTGTCCAAGGCTCTGAAGTCTTTCGAGGGTGGTGTTGTCATCATTACTCAC 4286 Score = 93.3 bits (102), Expect = 9e-14 Identities = 140/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| ||||| || ||||| ||||| ||||| || ||||| |||| ||||| Sbjct 3515 CTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCCACCCTGGTCAACGTCCT 3574 Query 280220 GACTGGCGA---GACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGAT 280276 ||| || || || || |||||| | ||| | |||| ||||| || || Sbjct 3575 GACCGGTGAATTGATCCCCACCACTGGTGA---CGTGTACCAGCACGAGAACATCCGTAT 3631 Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336 || ||| || |||||||||||| |||||||| |||||||| |||| || || Sbjct 3632 CGCCTACATCAAGCAGCACGCTTTCGCTCACATCGATAACCACCTCGACAGCACCCCCTC 3691 Query 280337 CCAATACATTCAGTGGCG 280354 | | ||||| |||||||| Sbjct 3692 CGAGTACATCCAGTGGCG 3709 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || |||| ||||| || || || |||| ||||| |||| ||| Sbjct 2700 GGTGAGGATCTCTGCAACTGCACCTTCTCTCTGGCCTACGGTGCCAAGATCTTGCTTAAC 2759 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| | |||||||| | || || ||||| |||||||||| || | Sbjct 2760 CAGACTCACCTCCGTCTGAAGCGTGGTCAGCGTTACGGTCTGCTCGGTCCCAACGGTACC 2819 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || |||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 2820 GGAAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAAG 2879 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 ||||| | ||| || || || ||||||||| Sbjct 2880 GACGAGGTCAAGACCGTCTACGTCGAGCACGAC 2912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027768952492832