Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq20 118 2e-21
seq923 104 5e-17
>seq20
Length=61044
Score = 118 bits (130), Expect = 2e-21
Identities = 273/404 (68%), Gaps = 12/404 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||| || |||| ||||| ||||||||||||||||||||| |||
Sbjct 3805 TCGAAGAAGTTGGTCTTACCAGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 3746
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|||||| | | ||| | | ||| || || || | || ||||| ||||| ||||| |
Sbjct 3745 GCATTGAAGTACTTCGCGTTGCCGAGAGCGACCAGGAGACGGTCAGCCACGAACTCGATG 3686
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | ||||||||||| | | ||| || | || || | |
Sbjct 3685 TACTGGCACATCAGGTTGGAGTTCATGCCGAGGAGGGCACAGGGGAGGGCATCGGTCAAG 3626
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC----CTGTGCCAGAGA 251798
|| ||||| ||| | | || ||||| | | || ||| || | | | | |
Sbjct 3625 AACTCCTTCTCGATTGAGACAGCCTCAACGATGATGTCCTCGACAACTTTCTTGCTGGGG 3566
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
| | ||||| || | ||| | || ||| || || | | ||| ||||||||||
Sbjct 3565 C-GGTTGTT---GAGGTGAGAGAAGAGCAAGCAGGCGAAGTCGGT-GTGGAGACCCTCGT 3511
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| ||| ||||| |||||| || | || || ||||||| ||||| ||| | ||||
Sbjct 3510 CACGAGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGGCCACGCTTCTTAAGCC 3451
Query 251918 AGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960
| ||||| | |||||| || || ||||| | | |||||| ||
Sbjct 3450 AAAAGATGGAAGCAAAA-GACCCGGAGAAGAAAATACCCTCAAC 3408
>seq923
Length=9260
Score = 104 bits (114), Expect = 5e-17
Identities = 170/240 (71%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 280649 CAAGAATGTTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACT 280707
|||| | |||||| ||| | || || | | |||||||| ||||| | ||||||
Sbjct 4049 CAAGGAGATTGAGGCCCACTGCGAGCA-GTTCGGTCTGGATGCCGAGCTGGTCTCTCACT 4107
Query 280708 CTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTG 280766
| || || |||||||| || || || ||| ||||| | || ||| || |||| |
Sbjct 4108 CGCGTATGCGCGGTCTCTCCGGTGGTCAGCGTGTCAAGGTCGTGCTCGCCGCCTGCTC-G 4166
Query 280767 TGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGC 280826
||||| | ||||||||||||||| |||||||| || |||||||| |||||||| || |
Sbjct 4167 TGGCAGCGCCCTCACGTGATCGTCCTCGACGAACCCACCAACTACCTGGACCGTGACTCC 4226
Query 280827 CTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTCTCAC 280886
|| || |||||| |||||| | | || | || || || || ||||| |||||
Sbjct 4227 CTTGGTGCTCTGTCCAAGGCTCTGAAGTCTTTCGAGGGTGGTGTTGTCATCATTACTCAC 4286
Score = 93.3 bits (102), Expect = 9e-14
Identities = 140/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || |||| ||||| || ||||| ||||| ||||| || ||||| |||| |||||
Sbjct 3515 CTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCCACCCTGGTCAACGTCCT 3574
Query 280220 GACTGGCGA---GACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGAT 280276
||| || || || || |||||| | ||| | |||| ||||| || ||
Sbjct 3575 GACCGGTGAATTGATCCCCACCACTGGTGA---CGTGTACCAGCACGAGAACATCCGTAT 3631
Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336
|| ||| || |||||||||||| |||||||| |||||||| |||| || ||
Sbjct 3632 CGCCTACATCAAGCAGCACGCTTTCGCTCACATCGATAACCACCTCGACAGCACCCCCTC 3691
Query 280337 CCAATACATTCAGTGGCG 280354
| | ||||| ||||||||
Sbjct 3692 CGAGTACATCCAGTGGCG 3709
Score = 87.8 bits (96), Expect = 4e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || |||| ||||| || || || |||| ||||| |||| |||
Sbjct 2700 GGTGAGGATCTCTGCAACTGCACCTTCTCTCTGGCCTACGGTGCCAAGATCTTGCTTAAC 2759
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| | |||||||| | || || ||||| |||||||||| || |
Sbjct 2760 CAGACTCACCTCCGTCTGAAGCGTGGTCAGCGTTACGGTCTGCTCGGTCCCAACGGTACC 2819
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| |||| ||| || ||||| ||||| |||| ||||| || || || || ||
Sbjct 2820 GGAAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAAG 2879
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557
||||| | ||| || || || |||||||||
Sbjct 2880 GACGAGGTCAAGACCGTCTACGTCGAGCACGAC 2912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027768952492832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |