Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq430 165 2e-35
seq20 159 6e-34
seq245 132 9e-26
seq1475 91.5 3e-13
seq923 91.5 3e-13
>seq430
Length=18842
Score = 165 bits (182), Expect = 2e-35
Identities = 169/218 (78%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||||||| |||||||| || ||||||||||| || ||||||
Sbjct 6941 CCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAG 7000
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || | | || || || || ||
Sbjct 7001 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGG 7060
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| || ||||| | ||| || ||||||||||| ||| ||||| ||
Sbjct 7061 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTC-GCTGGATTCAAC 7119
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||||||||| ||||| ||||||||||||||||
Sbjct 7120 CTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGA 7157
Score = 163 bits (180), Expect = 5e-35
Identities = 176/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
|| ||||| || || || || | |||| ||| ||||| ||| || |||||||| ||
Sbjct 6479 TAGTTTCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAG 6538
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
|| ||||| |||| || || || | |||||| ||||| || || || | || ||||||
Sbjct 6539 TCCGAGAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCG 6598
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408
|| || ||||| ||||| ||||||||||| ||||||| ||||| ||||| | |
Sbjct 6599 GGAGGGATGCCCTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTT 6658
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || ||||| ||||| || || || ||||||||||||||||| ||||||||
Sbjct 6659 TCCACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || ||||||||||||||||| ||||||||
Sbjct 6713 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 6772
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || |||||||| ||||| || || | | || |||||||| ||
Sbjct 6773 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGG 6832
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||| ||||| ||| ||| ||||||||||||| || ||
Sbjct 6833 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACC 6892
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||| |||||||| ||||| ||||||||||| || |||||
Sbjct 6893 TCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
Score = 131 bits (144), Expect = 3e-25
Identities = 154/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | || | ||| || |||||||| || |||||||| || |||||
Sbjct 7235 CCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 7294
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || || || || ||
Sbjct 7295 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGG 7354
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| |||||||| || ||||| ||||||| ||||||||||| ||| || || ||
Sbjct 7355 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTC-GCTCGACTCGAC 7413
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 7414 CTCGAGGGTGATGGTCTTGCCGGTGA 7439
>seq20
Length=61044
Score = 159 bits (176), Expect = 6e-34
Identities = 305/441 (69%), Gaps = 10/441 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||| || || ||||||||||| || || || |||||||||||||| ||| || |
Sbjct 3842 CATAACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGC 3783
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || || |||||||||||| |||||||| ||| || | ||| | || ||
Sbjct 3782 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCGCGTTGCC 3723
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | |||||||||||||||||||||||||||| |||||||| |||||
Sbjct 3722 GAGAGCGACCAGGAGACGGTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGAGTT 3663
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||| | | | ||||||| ||| ||| | ||| ||||| ||| | | ||| ||
Sbjct 3662 CATGCCGAGGAGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTTCTCGATTGAGACAGC 3603
Query 10175 TTCCTCGACGATGCTCTTTACCAC-GTCAAG--GGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| ||| |||| || || || || | || | ||||| ||| | || |
Sbjct 3602 CTCAACGATGATGTCCTCGACAACTTTCTTGCTGGGGCGGTTGTT---GAGGTGAGAGAA 3546
Query 10232 CAG-GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
|| ||| | || | | |||||| |||||||| || ||||| |||||| || |
Sbjct 3545 GAGCAAGCAGGCGAAGTCGGT-GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGA 3487
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCG 10349
| ||||||||||| || || || || ||||| || |||| ||| || ||||||
Sbjct 3486 AGGTGAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCA-AAAGACCCG 3428
Query 10350 GAGAACAGAAGACCCTCCACG 10370
||||| | || |||||| |||
Sbjct 3427 GAGAAGAAAATACCCTCAACG 3407
>seq245
Length=44002
Score = 132 bits (146), Expect = 9e-26
Identities = 139/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| || ||||| ||
Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || |||||||| |||||||| |||||||| || ||||| | ||||||| |||
Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 3900
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 3899 ATGGTGTC-GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3841
>seq1475
Length=4530
Score = 91.5 bits (100), Expect = 3e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 225524 ACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATG 225583
|||||| ||||||| ||||| |||||||||||||| || || | ||| || | ||
Sbjct 2006 ACGTTGGCCACGTCCAGATGGTTAGTAGGTTCGTCCAGCAGAAGCACGTCGGCCTTCATC 1947
Query 225584 AGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCC 225636
|| ||||| |||| || | ||||||||||||||| || |||||||| || ||
Sbjct 1946 AGCATGGCACGCGCCAGCGCCAGCTTCATTTTCCAACCACCGGACAGCGACCC 1894
>seq923
Length=9260
Score = 91.5 bits (100), Expect = 3e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876
|||||| ||||| ||||| | || || ||||| | ||||| |||| || | ||
Sbjct 2873 GGGGAAACCCTCGAGCTGCTCGTTGTTGATGGCACGCATGAGGGTGGTCTTTCCGGTACC 2814
Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936
||||||||||| || |||||| | | || ||||| | |||| | || ||| ||
Sbjct 2813 GTTGGGACCGAGCAGACCGTAACGCTGACCACGCTTCAGACGGAGGTGAGTCTGGTTAAG 2754
Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
| ||||||| |||| ||||| || ||||| ||| | ||| || ||||||||||| ||
Sbjct 2753 CAAGATCTTGGCACCGTAGGCCAGAGAGAAGGTGCAGTTGCAGAGATCCTCACCCTCTTC 2694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921563047517440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |