Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq430 165 2e-35 seq20 159 6e-34 seq245 132 9e-26 seq1475 91.5 3e-13 seq923 91.5 3e-13 >seq430 Length=18842 Score = 165 bits (182), Expect = 2e-35 Identities = 169/218 (78%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||||||| |||||||| || ||||||||||| || |||||| Sbjct 6941 CCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAG 7000 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || || || || || Sbjct 7001 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGG 7060 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | ||| || ||||||||||| ||| ||||| || Sbjct 7061 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTC-GCTGGATTCAAC 7119 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| ||||| |||||||||||||||| Sbjct 7120 CTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGA 7157 Score = 163 bits (180), Expect = 5e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || ||||| || || || || | |||| ||| ||||| ||| || |||||||| || Sbjct 6479 TAGTTTCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAG 6538 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || ||||| |||| || || || | |||||| ||||| || || || | || |||||| Sbjct 6539 TCCGAGAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCG 6598 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 || || ||||| ||||| ||||||||||| ||||||| ||||| ||||| | | Sbjct 6599 GGAGGGATGCCCTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTT 6658 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| ||||| || || || ||||||||||||||||| |||||||| Sbjct 6659 TCCACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||||||||||||||| |||||||| Sbjct 6713 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 6772 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| ||||| || || | | || |||||||| || Sbjct 6773 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGG 6832 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||| ||||| ||| ||| ||||||||||||| || || Sbjct 6833 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACC 6892 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| |||||||| ||||| ||||||||||| || ||||| Sbjct 6893 TCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939 Score = 131 bits (144), Expect = 3e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| || |||||||| || |||||||| || ||||| Sbjct 7235 CCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 7294 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || || || || || Sbjct 7295 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGG 7354 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||| ||||||| ||||||||||| ||| || || || Sbjct 7355 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTC-GCTCGACTCGAC 7413 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 7414 CTCGAGGGTGATGGTCTTGCCGGTGA 7439 >seq20 Length=61044 Score = 159 bits (176), Expect = 6e-34 Identities = 305/441 (69%), Gaps = 10/441 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| || || ||||||||||| || || || |||||||||||||| ||| || | Sbjct 3842 CATAACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGC 3783 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || || |||||||||||| |||||||| ||| || | ||| | || || Sbjct 3782 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCGCGTTGCC 3723 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||||||||||||||||||||||||| |||||||| ||||| Sbjct 3722 GAGAGCGACCAGGAGACGGTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGAGTT 3663 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | ||||||| ||| ||| | ||| ||||| ||| | | ||| || Sbjct 3662 CATGCCGAGGAGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTTCTCGATTGAGACAGC 3603 Query 10175 TTCCTCGACGATGCTCTTTACCAC-GTCAAG--GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || ||| |||| || || || || | || | ||||| ||| | || | Sbjct 3602 CTCAACGATGATGTCCTCGACAACTTTCTTGCTGGGGCGGTTGTT---GAGGTGAGAGAA 3546 Query 10232 CAG-GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 || ||| | || | | |||||| |||||||| || ||||| |||||| || | Sbjct 3545 GAGCAAGCAGGCGAAGTCGGT-GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGA 3487 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCG 10349 | ||||||||||| || || || || ||||| || |||| ||| || |||||| Sbjct 3486 AGGTGAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCA-AAAGACCCG 3428 Query 10350 GAGAACAGAAGACCCTCCACG 10370 ||||| | || |||||| ||| Sbjct 3427 GAGAAGAAAATACCCTCAACG 3407 >seq245 Length=44002 Score = 132 bits (146), Expect = 9e-26 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || |||||||| |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 3900 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 3899 ATGGTGTC-GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3841 >seq1475 Length=4530 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 225524 ACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATG 225583 |||||| ||||||| ||||| |||||||||||||| || || | ||| || | || Sbjct 2006 ACGTTGGCCACGTCCAGATGGTTAGTAGGTTCGTCCAGCAGAAGCACGTCGGCCTTCATC 1947 Query 225584 AGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCC 225636 || ||||| |||| || | ||||||||||||||| || |||||||| || || Sbjct 1946 AGCATGGCACGCGCCAGCGCCAGCTTCATTTTCCAACCACCGGACAGCGACCC 1894 >seq923 Length=9260 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||| ||||| ||||| | || || ||||| | ||||| |||| || | || Sbjct 2873 GGGGAAACCCTCGAGCTGCTCGTTGTTGATGGCACGCATGAGGGTGGTCTTTCCGGTACC 2814 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 ||||||||||| || |||||| | | || ||||| | |||| | || ||| || Sbjct 2813 GTTGGGACCGAGCAGACCGTAACGCTGACCACGCTTCAGACGGAGGTGAGTCTGGTTAAG 2754 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 | ||||||| |||| ||||| || ||||| ||| | ||| || ||||||||||| || Sbjct 2753 CAAGATCTTGGCACCGTAGGCCAGAGAGAAGGTGCAGTTGCAGAGATCCTCACCCTCTTC 2694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921563047517440