Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq430 129 1e-24 seq245 104 6e-17 seq20 91.5 3e-13 seq635 87.8 4e-12 >seq430 Length=18842 Score = 129 bits (142), Expect = 1e-24 Identities = 170/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||||| || || || || | ||| || || || ||||| || ||||| | Sbjct 6484 TCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGA 6543 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 |||||| |||||||| || | || || || || |||||||||||||| || || Sbjct 6544 GAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGG 6603 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATC---GCTCGATT 288421 ||| || || ||||| || || || ||| || ||||| || || | || ||| || Sbjct 6604 GATGCCCTCCTTATCTTGAATCTT-GCTCTTGACGTTGTCGATCGTGTCCGAGCT---TT 6659 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | |||||||||||| || || || ||||||||||| |||||||| Sbjct 6660 CCACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711 Score = 127 bits (140), Expect = 5e-24 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| ||||| |||| || ||||||||||| || || |||| Sbjct 6713 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 6772 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || || ||||||| |||||| || ||| Sbjct 6773 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGG 6832 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCT-- 288423 || || || ||||| ||||| || ||| |||||||| || || | | || | ||| Sbjct 6833 ATGCCCTCCTTATCTTGGATCTT-GCTCTTCACGTTATCGATGG--TGTCTGAACTCTCC 6889 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| || ||||| |||||||||||||| || ||||| Sbjct 6890 ACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939 Score = 127 bits (140), Expect = 5e-24 Identities = 156/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || ||||| |||| ||| || || ||||| || |||| Sbjct 7231 CATG-CCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 7289 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||| || || || | || || || ||||||||||||||||| ||| | Sbjct 7290 CGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAG 7349 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420 ||||| || || || |||||||| || ||| || ||||| || || | |||||||| Sbjct 7350 GGGGGATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCGCTCGAC 7408 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| ||||| ||||| Sbjct 7409 TCGACCTCGAGGGTGATGGTCTTGCCGGT 7437 >seq245 Length=44002 Score = 104 bits (114), Expect = 6e-17 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || |||||||| Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||| || || ||| || || || || |||||||| || | || ||||| Sbjct 3959 AGACGCTGCTGG---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3903 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||||| || || ||||| || || ||||| || ||||| ||||||||| Sbjct 3902 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3843 Query 288463 AA 288464 || Sbjct 3842 AA 3841 >seq20 Length=61044 Score = 91.5 bits (100), Expect = 3e-13 Identities = 162/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 269108 CAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCG 269167 ||| ||| || |||||| | || || |||| ||| | | |||| ||||| || Sbjct 3610 CAATCGAGAAGGAGTTCTTGACCGATGCCCTCCCCTGTGCCCTCCTCGGCATGAACTCCA 3669 Query 269168 ATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATG 269227 | || ||| || || ||||| ||||||||||| ||| || | || ||||| | | Sbjct 3670 ACCTGATGTGCCAGTACATCGAGTTCGTGGCTGACCGTCTCCTGGTCGCTCTCGGCAACG 3729 Query 269228 AGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAA 269287 ||| | |||| | | || ||||||| ||| ||||| || ||||| | || | Sbjct 3730 CGAAGTACTTCAATGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCTGGTA 3789 Query 269288 AGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGTAATG 269340 |||| ||||||||||| ||||||||| | ||||| || | | || ||||| ||| Sbjct 3790 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTTATG 3842 >seq635 Length=16049 Score = 87.8 bits (96), Expect = 4e-12 Identities = 207/308 (67%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 ||||| || |||||||||| ||| |||| | || || | || || ||||||| | Sbjct 6281 ACGATGGGGGTGATGAACTCTATCAGGAACTCGGGGATCTTCAGCAGGCTAGGGAACTGG 6340 Query 326024 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 326083 || | ||||| |||| |||||| |||||| | ||||| |||| |||||| Sbjct 6341 GCCTGCAGGAAGTTGATGAGGAGACCCTTGATGTGACTACCGTCGTGATCCTGATCGGTC 6400 Query 326084 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 326143 |||||||||| ||| |||||||||||| ||||| |||| | || | || Sbjct 6401 ATGATCATCAGATGGCCGTAACGAAGCCCACGGGTGTCGGTGTATTCCTTTTTGTGCTGC 6460 Query 326144 AGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA--TGCTTGCCACG 326200 | |||| ||| || |||| | |||||| ||||||| | || |||| | | Sbjct 6461 AATCCGATGAAGTT-CTTGATGTTTTGGATTTCCGCGTTCTTGGAGATTTGCT--CGAAA 6517 Query 326201 GATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGA 326260 || || || || ||||| | || ||||| || || ||||| || ||| | ||| | Sbjct 6518 GACGCGTCACGCACGTTGAGCAGCTTTCCTCGCAGCGGGAAGACGCCAAAGAGATCGGGG 6577 Query 326261 CCGACCAC 326268 |||||||| Sbjct 6578 CCGACCAC 6585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179576531013056