Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq430 129 1e-24
seq245 104 6e-17
seq20 91.5 3e-13
seq635 87.8 4e-12
>seq430
Length=18842
Score = 129 bits (142), Expect = 1e-24
Identities = 170/232 (73%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||||| || || || || | ||| || || || ||||| || ||||| |
Sbjct 6484 TCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGA 6543
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|||||| |||||||| || | || || || || |||||||||||||| || ||
Sbjct 6544 GAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGG 6603
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATC---GCTCGATT 288421
||| || || ||||| || || || ||| || ||||| || || | || ||| ||
Sbjct 6604 GATGCCCTCCTTATCTTGAATCTT-GCTCTTGACGTTGTCGATCGTGTCCGAGCT---TT 6659
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | |||||||||||| || || || ||||||||||| ||||||||
Sbjct 6660 CCACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 127 bits (140), Expect = 5e-24
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| ||||| |||| || ||||||||||| || || ||||
Sbjct 6713 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 6772
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || || || || || || ||||||| |||||| || |||
Sbjct 6773 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGG 6832
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCT-- 288423
|| || || ||||| ||||| || ||| |||||||| || || | | || | |||
Sbjct 6833 ATGCCCTCCTTATCTTGGATCTT-GCTCTTCACGTTATCGATGG--TGTCTGAACTCTCC 6889
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||||||||| || ||||| |||||||||||||| || |||||
Sbjct 6890 ACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
Score = 127 bits (140), Expect = 5e-24
Identities = 156/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| |||||||| || | || ||||| |||| ||| || || ||||| || ||||
Sbjct 7231 CATG-CCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 7289
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| || || || | || || || ||||||||||||||||| ||| |
Sbjct 7290 CGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAG 7349
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420
||||| || || || |||||||| || ||| || ||||| || || | ||||||||
Sbjct 7350 GGGGGATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCGCTCGAC 7408
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGT 288449
|| || ||||| ||||| ||||| |||||
Sbjct 7409 TCGACCTCGAGGGTGATGGTCTTGCCGGT 7437
>seq245
Length=44002
Score = 104 bits (114), Expect = 6e-17
Identities = 133/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || ||||| || || || | || || || ||||||||
Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||||||| || || ||| || || || || |||||||| || | || |||||
Sbjct 3959 AGACGCTGCTGG---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3903
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | |||||||| || || ||||| || || ||||| || ||||| |||||||||
Sbjct 3902 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3843
Query 288463 AA 288464
||
Sbjct 3842 AA 3841
>seq20
Length=61044
Score = 91.5 bits (100), Expect = 3e-13
Identities = 162/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 269108 CAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCG 269167
||| ||| || |||||| | || || |||| ||| | | |||| ||||| ||
Sbjct 3610 CAATCGAGAAGGAGTTCTTGACCGATGCCCTCCCCTGTGCCCTCCTCGGCATGAACTCCA 3669
Query 269168 ATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATG 269227
| || ||| || || ||||| ||||||||||| ||| || | || ||||| | |
Sbjct 3670 ACCTGATGTGCCAGTACATCGAGTTCGTGGCTGACCGTCTCCTGGTCGCTCTCGGCAACG 3729
Query 269228 AGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAA 269287
||| | |||| | | || ||||||| ||| ||||| || ||||| | || |
Sbjct 3730 CGAAGTACTTCAATGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCTGGTA 3789
Query 269288 AGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGTAATG 269340
|||| ||||||||||| ||||||||| | ||||| || | | || ||||| |||
Sbjct 3790 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTTATG 3842
>seq635
Length=16049
Score = 87.8 bits (96), Expect = 4e-12
Identities = 207/308 (67%), Gaps = 6/308 (2%)
Strand=Plus/Plus
Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023
||||| || |||||||||| ||| |||| | || || | || || ||||||| |
Sbjct 6281 ACGATGGGGGTGATGAACTCTATCAGGAACTCGGGGATCTTCAGCAGGCTAGGGAACTGG 6340
Query 326024 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 326083
|| | ||||| |||| |||||| |||||| | ||||| |||| ||||||
Sbjct 6341 GCCTGCAGGAAGTTGATGAGGAGACCCTTGATGTGACTACCGTCGTGATCCTGATCGGTC 6400
Query 326084 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 326143
|||||||||| ||| |||||||||||| ||||| |||| | || | ||
Sbjct 6401 ATGATCATCAGATGGCCGTAACGAAGCCCACGGGTGTCGGTGTATTCCTTTTTGTGCTGC 6460
Query 326144 AGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA--TGCTTGCCACG 326200
| |||| ||| || |||| | |||||| ||||||| | || |||| | |
Sbjct 6461 AATCCGATGAAGTT-CTTGATGTTTTGGATTTCCGCGTTCTTGGAGATTTGCT--CGAAA 6517
Query 326201 GATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGA 326260
|| || || || ||||| | || ||||| || || ||||| || ||| | ||| |
Sbjct 6518 GACGCGTCACGCACGTTGAGCAGCTTTCCTCGCAGCGGGAAGACGCCAAAGAGATCGGGG 6577
Query 326261 CCGACCAC 326268
||||||||
Sbjct 6578 CCGACCAC 6585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179576531013056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |