Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq20 105 1e-17
seq1475 89.7 1e-12
seq635 86.0 1e-11
>seq20
Length=61044
Score = 105 bits (116), Expect = 1e-17
Identities = 295/442 (67%), Gaps = 12/442 (3%)
Strand=Plus/Plus
Query 243318 CGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAG 243376
|||||| |||||| | || |||||| ||| ||| ||||||||||||| ||| |
Sbjct 3407 CGTTGAGGGTATTTTCTTCTCCGGGTCTTT-TGCTTCCATCTTTTGGCTTAAGAAGCGTG 3465
Query 243377 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436
| ||||||| || ||| | || |||||| ||||| ||| |||||||| || |||
Sbjct 3466 GCCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCACA 3525
Query 243437 AACAGTTCGGTGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGA-AACG-- 243492
| |||| |||| | | || | ||| ||||| | || | | || |
Sbjct 3526 CCGACTTCGCCT-GCTTGCTCTTCTCTCACCTC---AACAACCGCCCCAGCAAGAAAGTT 3581
Query 243493 GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATT 243552
||| | | |||||| || || || || ||| ||||| ||| | ||| || |
Sbjct 3582 GTCGAGGACATCATCGTTGAGGCTGTCTCAATCGAGAAGGAGTTCTTGACCGATGCCCTC 3641
Query 243553 CCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCC 243612
|| || || | ||||||||||| | || ||| | ||||||||||| ||||| ||
Sbjct 3642 CCCTGTGCCCTCCTCGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTGGCT 3701
Query 243613 GACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCC 243672
||||| | | |||| || || | | ||| | ||| ||| |||||||| | |
Sbjct 3702 GACCGTCTCCTGGTCGCTCTCGGCAACGCGAAGTACTTCAATGCCACCAACCCCTTCGAC 3761
Query 243673 TTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGAT 243732
|| |||||| || ||||| || || || ||||||||||| ||||||||| ||||
Sbjct 3762 TTCATGGAGTCGATCTCGCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 3821
Query 243733 TATCA-ACGCCCTGGTGTGATG 243753
|| || | | || ||||| |||
Sbjct 3822 TACCAGAAGGCC-GGTGTTATG 3842
>seq1475
Length=4530
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 333795 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTA 333854
||||| || ||||||||||||| |||||||| || |||| | | | ||| |
Sbjct 2096 GTGCACACCTCGTCGAGGAACCCAGAGTCGTGACTGACGATCAAACTGGTGATGTCGGTG 2037
Query 333855 AGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGC 333914
| || |||||||||| || |||| | ||||| | ||| |||||||| || ||
Sbjct 2036 TGCTTCTTCAGGTATTCCTGCAACCACTTGACGTTGGCCACGTCCAGATGGTTAGTAGGT 1977
Query 333915 TCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 333974
||||| || || || | | || |||| ||||| ||||| || || || || ||||||
Sbjct 1976 TCGTCCAGCAGAAGCACGTCGGCCTTCATCAGCATGGCACGCGCCAGCGCCAGCTTCATT 1917
Query 333975 TTCCACCCTCCTGAAAG 333991
||||| || || || ||
Sbjct 1916 TTCCAACCACCGGACAG 1900
>seq635
Length=16049
Score = 86.0 bits (94), Expect = 1e-11
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144
||||| || |||||||||| ||| |||| | || || | || || ||||||| |
Sbjct 6281 ACGATGGGGGTGATGAACTCTATCAGGAACTCGGGGATCTTCAGCAGGCTAGGGAACTGG 6340
Query 298145 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 298204
|| | ||||| |||| |||||| |||||| | ||||| |||| ||||||
Sbjct 6341 GCCTGCAGGAAGTTGATGAGGAGACCCTTGATGTGACTACCGTCGTGATCCTGATCGGTC 6400
Query 298205 ATGATCATCACATGACCGTAACGAAGC 298231
|||||||||| ||| ||||||||||||
Sbjct 6401 ATGATCATCAGATGGCCGTAACGAAGC 6427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102807198891200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |