Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq20 105 1e-17 seq1475 89.7 1e-12 seq635 86.0 1e-11 >seq20 Length=61044 Score = 105 bits (116), Expect = 1e-17 Identities = 295/442 (67%), Gaps = 12/442 (3%) Strand=Plus/Plus Query 243318 CGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAG 243376 |||||| |||||| | || |||||| ||| ||| ||||||||||||| ||| | Sbjct 3407 CGTTGAGGGTATTTTCTTCTCCGGGTCTTT-TGCTTCCATCTTTTGGCTTAAGAAGCGTG 3465 Query 243377 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436 | ||||||| || ||| | || |||||| ||||| ||| |||||||| || ||| Sbjct 3466 GCCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCACA 3525 Query 243437 AACAGTTCGGTGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGA-AACG-- 243492 | |||| |||| | | || | ||| ||||| | || | | || | Sbjct 3526 CCGACTTCGCCT-GCTTGCTCTTCTCTCACCTC---AACAACCGCCCCAGCAAGAAAGTT 3581 Query 243493 GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATT 243552 ||| | | |||||| || || || || ||| ||||| ||| | ||| || | Sbjct 3582 GTCGAGGACATCATCGTTGAGGCTGTCTCAATCGAGAAGGAGTTCTTGACCGATGCCCTC 3641 Query 243553 CCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCC 243612 || || || | ||||||||||| | || ||| | ||||||||||| ||||| || Sbjct 3642 CCCTGTGCCCTCCTCGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTGGCT 3701 Query 243613 GACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCC 243672 ||||| | | |||| || || | | ||| | ||| ||| |||||||| | | Sbjct 3702 GACCGTCTCCTGGTCGCTCTCGGCAACGCGAAGTACTTCAATGCCACCAACCCCTTCGAC 3761 Query 243673 TTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGAT 243732 || |||||| || ||||| || || || ||||||||||| ||||||||| |||| Sbjct 3762 TTCATGGAGTCGATCTCGCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 3821 Query 243733 TATCA-ACGCCCTGGTGTGATG 243753 || || | | || ||||| ||| Sbjct 3822 TACCAGAAGGCC-GGTGTTATG 3842 >seq1475 Length=4530 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 333795 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTA 333854 ||||| || ||||||||||||| |||||||| || |||| | | | ||| | Sbjct 2096 GTGCACACCTCGTCGAGGAACCCAGAGTCGTGACTGACGATCAAACTGGTGATGTCGGTG 2037 Query 333855 AGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGC 333914 | || |||||||||| || |||| | ||||| | ||| |||||||| || || Sbjct 2036 TGCTTCTTCAGGTATTCCTGCAACCACTTGACGTTGGCCACGTCCAGATGGTTAGTAGGT 1977 Query 333915 TCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 333974 ||||| || || || | | || |||| ||||| ||||| || || || || |||||| Sbjct 1976 TCGTCCAGCAGAAGCACGTCGGCCTTCATCAGCATGGCACGCGCCAGCGCCAGCTTCATT 1917 Query 333975 TTCCACCCTCCTGAAAG 333991 ||||| || || || || Sbjct 1916 TTCCAACCACCGGACAG 1900 >seq635 Length=16049 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144 ||||| || |||||||||| ||| |||| | || || | || || ||||||| | Sbjct 6281 ACGATGGGGGTGATGAACTCTATCAGGAACTCGGGGATCTTCAGCAGGCTAGGGAACTGG 6340 Query 298145 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 298204 || | ||||| |||| |||||| |||||| | ||||| |||| |||||| Sbjct 6341 GCCTGCAGGAAGTTGATGAGGAGACCCTTGATGTGACTACCGTCGTGATCCTGATCGGTC 6400 Query 298205 ATGATCATCACATGACCGTAACGAAGC 298231 |||||||||| ||| |||||||||||| Sbjct 6401 ATGATCATCAGATGGCCGTAACGAAGC 6427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102807198891200