Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20 129 6e-25 seq245 89.7 5e-13 seq430 87.8 2e-12 >seq20 Length=61044 Score = 129 bits (142), Expect = 6e-25 Identities = 294/443 (66%), Gaps = 21/443 (5%) Strand=Plus/Plus Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463 || || |||||| || ||||| | || || ||||| ||||| ||||||||| Sbjct 3393 GTTGCTTTCGCCGCCGTTGAGGGTATTTTCTTCTCCGGGTCTTTTGCTTCCATCTTTTGG 3452 Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523 |||| | | ||| | |||||||| || || ||| |||||| | || || || ||| Sbjct 3453 CTTAAGAAGCGTGGCCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGAC 3512 Query 52524 GAAGGACTGCACACGGACTTTGCGTGC--------CTCT-ACTACAAGACGCGCGTGACC 52574 || || || ||||| ||||| || ||| |||| || ||| | ||| | | Sbjct 3513 GAGGGTCTCCACACCGACTTCGCCTGCTTGCTCTTCTCTCACCTCAACAACCGCCCCAGC 3572 Query 52575 GAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAG 52634 | ||| | | ||||| ||| ||| ||||| || | ||||| ||| Sbjct 3573 AAGAAAGTTGTCGAGGACATCATC--------GTT----GAGGCTGTCTCAATCGAGAAG 3620 Query 52635 GAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGC 52694 ||||| || || | || || || | || || ||||||||| | | |||||| Sbjct 3621 GAGTTCTTGACCGATGCCCTCCCCTGTGCCCTCCTCGGCATGAACTCCAACCTGATGTGC 3680 Query 52695 GAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTC 52754 ||||||||||||| ||||| || ||||| |||| ||||| | | ||||||||| Sbjct 3681 CAGTACATCGAGTTCGTGGCTGACCGTCTCCTGGTCGCTCTCGGCAACGCGAAGTACTTC 3740 Query 52755 AACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTT 52814 || || ||| || || || || ||| | || ||||| | || ||||||||||| Sbjct 3741 AATGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCTGGTAAGACCAACTTC 3800 Query 52815 TTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||||||| ||||| || || Sbjct 3801 TTCGAGAAGCGTGTCGGTGACTA 3823 >seq245 Length=44002 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | |||||||| ||||| || || || || || ||||| ||| || || | | | Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3902 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 3901 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3842 Query 138605 AA 138606 || Sbjct 3841 AA 3840 >seq430 Length=18842 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| | || || ||||||||| || ||||||| | | Sbjct 6520 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAA 6579 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||| ||||| ||||| || || || || || ||| | || | || | | Sbjct 6580 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATC-TTGAATCTTGCTCTTGACGT 6638 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | |||||||| | ||| | ||| || ||||| || || || Sbjct 6639 TG-TCGATCGTGTCCGAGCTTTCCACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTG 6697 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 6698 ACGAAGATCTGCAT 6711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496230440701440