Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq20 129 6e-25
seq245 89.7 5e-13
seq430 87.8 2e-12
>seq20
Length=61044
Score = 129 bits (142), Expect = 6e-25
Identities = 294/443 (66%), Gaps = 21/443 (5%)
Strand=Plus/Plus
Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463
|| || |||||| || ||||| | || || ||||| ||||| |||||||||
Sbjct 3393 GTTGCTTTCGCCGCCGTTGAGGGTATTTTCTTCTCCGGGTCTTTTGCTTCCATCTTTTGG 3452
Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523
|||| | | ||| | |||||||| || || ||| |||||| | || || || |||
Sbjct 3453 CTTAAGAAGCGTGGCCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGAC 3512
Query 52524 GAAGGACTGCACACGGACTTTGCGTGC--------CTCT-ACTACAAGACGCGCGTGACC 52574
|| || || ||||| ||||| || ||| |||| || ||| | ||| | |
Sbjct 3513 GAGGGTCTCCACACCGACTTCGCCTGCTTGCTCTTCTCTCACCTCAACAACCGCCCCAGC 3572
Query 52575 GAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAG 52634
| ||| | | ||||| ||| ||| ||||| || | ||||| |||
Sbjct 3573 AAGAAAGTTGTCGAGGACATCATC--------GTT----GAGGCTGTCTCAATCGAGAAG 3620
Query 52635 GAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGC 52694
||||| || || | || || || | || || ||||||||| | | ||||||
Sbjct 3621 GAGTTCTTGACCGATGCCCTCCCCTGTGCCCTCCTCGGCATGAACTCCAACCTGATGTGC 3680
Query 52695 GAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTC 52754
||||||||||||| ||||| || ||||| |||| ||||| | | |||||||||
Sbjct 3681 CAGTACATCGAGTTCGTGGCTGACCGTCTCCTGGTCGCTCTCGGCAACGCGAAGTACTTC 3740
Query 52755 AACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTT 52814
|| || ||| || || || || ||| | || ||||| | || |||||||||||
Sbjct 3741 AATGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCTGGTAAGACCAACTTC 3800
Query 52815 TTCGAGAAGCGAGTCGGCGAGTA 52837
||||||||||| ||||| || ||
Sbjct 3801 TTCGAGAAGCGTGTCGGTGACTA 3823
>seq245
Length=44002
Score = 89.7 bits (98), Expect = 5e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || ||||| || || ||||| | |||
Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544
| |||||||| ||||| || || || || || ||||| ||| || || | | |
Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3902
Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604
| | ||||||| ||||||| || |||| || | || ||||| ||||| || || || |
Sbjct 3901 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3842
Query 138605 AA 138606
||
Sbjct 3841 AA 3840
>seq430
Length=18842
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || ||||||||||| | || || ||||||||| || ||||||| | |
Sbjct 6520 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAA 6579
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
||| |||||||| ||||| ||||| || || || || || ||| | || | || | |
Sbjct 6580 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATC-TTGAATCTTGCTCTTGACGT 6638
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | ||||| | |||||||| | ||| | ||| || ||||| || || ||
Sbjct 6639 TG-TCGATCGTGTCCGAGCTTTCCACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTG 6697
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 6698 ACGAAGATCTGCAT 6711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496230440701440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |