Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq430 131 2e-25
seq245 104 2e-17
>seq430
Length=18842
Score = 131 bits (144), Expect = 2e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||||||||| || ||||||||| || ||||| ||| || | ||| || ||
Sbjct 6743 GTAGACTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCG 6802
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||| |||||||| |||||||| ||||||||||| || ||| || |||
Sbjct 6803 GCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTC 6862
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | |||||| || || | || | |||||| ||||| |||||
Sbjct 6863 ACGTTATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTC 6922
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || || |||||
Sbjct 6923 TTGACGAAGATTTGCAT 6939
Score = 118 bits (130), Expect = 1e-21
Identities = 132/174 (76%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| || |||||| ||| || ||||| || |||
Sbjct 7265 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCA 7324
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| ||||||||||| || || ||||||||||||||| ||| || ||||
Sbjct 7325 GCGAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTG 7384
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| |||| |||||| | |||||| |||| ||| | || ||||||||
Sbjct 7385 ACGTTG-TCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 7437
Score = 113 bits (124), Expect = 4e-20
Identities = 125/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| ||||| || | ||| || || ||||| || ||||| |||
Sbjct 6941 CCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAG 7000
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || |||||| ||||||| ||||||||||| |||||
Sbjct 7001 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGG 7060
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTC 127053
|| |||||||||||| ||| ||| ||| | | |||| ||||||
Sbjct 7061 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTC 7107
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | ||| | |||| || | |||| ||| || || || ||||| ||
Sbjct 6484 TCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGA 6543
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||| || || || ||||| || || || |||||| |||||||| ||||||||
Sbjct 6544 GAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGG 6603
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||||||||| || || || ||||| |||| |||| ||||||| || || |
Sbjct 6604 GATGCCCTCCTTATCTTGAATCTTGCTCTTGACGTTG-TCGATCGTGTCCGAGCTTTCCA 6662
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || | || | ||| ||||| || || || || || || ||||||||
Sbjct 6663 CCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
>seq245
Length=44002
Score = 104 bits (114), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| || |||||| ||||
Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| |||||||| ||||| || ||||||||||||||| ||| || ||||| |||| ||
Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TC 3901
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | ||| || |||| ||| | || || || ||||| || || || ||
Sbjct 3900 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3841
Query 127105 A 127105
|
Sbjct 3840 A 3840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475470177748480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |