Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq155 89.7 5e-13
>seq155
Length=53423
Score = 89.7 bits (98), Expect = 5e-13
Identities = 322/498 (65%), Gaps = 12/498 (2%)
Strand=Plus/Minus
Query 123974 CGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGC 124033
||| |||||| ||| || | || || ||| || || || |||| ||| || ||
Sbjct 16163 CGAGGCAAAGCAGCTGAACATCCAGATCTTCGAGACTATCTACCACGGAGCTCTGACTGC 16104
Query 124034 GAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAG 124093
|| || ||||| || ||||| | ||||||| |||| |||| || | |
Sbjct 16103 TTCCTCGGAGCTTGCCAAGGAACACGGTACCTACGAAACGTACGAGGGCTCTCCCGTGTC 16044
Query 124094 CCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGG-A 124152
|| |||||| | ||||| ||||||||| || ||| || || || | ||||||||| |
Sbjct 16043 CCAGGGTATTCTCCAGTATGACATGTGGGATCGTACCCCCACCGATCTCTGGGACTGGGA 15984
Query 124153 GCGTTTTAAAACAACGCATATCGACGCA---CGGTTTGCGTAACTCGCTGTTGGTGGCGT 124209
| | || | | | |||| |||| ||| |||||||| ||| |||||||
Sbjct 15983 TACTCTCAAGGCCAAG---ATCG-CGCAGACCGGCGTGCGTAACAGTCTGCTGGTGGCAC 15928
Query 124210 ACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCA 124269
|||||||||||| | ||| ||| || | || |||||| | ||||||||| | ||
Sbjct 15927 CCATGCCGACGGCCAGCACGAGTCAGATCCTGGGCTTCAACGAGTGCTTCGAGCCCTACA 15868
Query 124270 CTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATT 124329
| || | ||| ||| || || || || ||||| || || || | || | |
Sbjct 15867 CGTCGAACATCTACTCGCGTCGTGTTTTGGCGGGCGAGTTCCAGGTCGTCAACCCTTGGC 15808
Query 124330 TGGTGGACGACTTGGTGG--CGTTAAATTTGTACGATGAAAACATGCGCAACGAAATTAT 124387
|| | | |||||||| | | |||| || || |||||| ||| || ||
Sbjct 15807 TGCTCAAGGACTTGGTCGACCTGGGTCTTTGGTCG--GATAACATGAAGAACCGCATCAT 15750
Query 124388 TGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAAGCAACTGTA 124447
||||| ||||| || ||| |||| | || || | | || ||||| |||||
Sbjct 15749 TGCGGATGGTGGATCGGTCCAGAACATCCCCAACATCCCCGCAGACATCAAGAGCCTGTA 15690
Query 124448 CAAAACCGTGTGGGAAAT 124465
||| ||||||||||| ||
Sbjct 15689 CAAGACCGTGTGGGAGAT 15672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451974090993920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |