Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq155 89.7 5e-13 >seq155 Length=53423 Score = 89.7 bits (98), Expect = 5e-13 Identities = 322/498 (65%), Gaps = 12/498 (2%) Strand=Plus/Minus Query 123974 CGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGC 124033 ||| |||||| ||| || | || || ||| || || || |||| ||| || || Sbjct 16163 CGAGGCAAAGCAGCTGAACATCCAGATCTTCGAGACTATCTACCACGGAGCTCTGACTGC 16104 Query 124034 GAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAG 124093 || || ||||| || ||||| | ||||||| |||| |||| || | | Sbjct 16103 TTCCTCGGAGCTTGCCAAGGAACACGGTACCTACGAAACGTACGAGGGCTCTCCCGTGTC 16044 Query 124094 CCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGG-A 124152 || |||||| | ||||| ||||||||| || ||| || || || | ||||||||| | Sbjct 16043 CCAGGGTATTCTCCAGTATGACATGTGGGATCGTACCCCCACCGATCTCTGGGACTGGGA 15984 Query 124153 GCGTTTTAAAACAACGCATATCGACGCA---CGGTTTGCGTAACTCGCTGTTGGTGGCGT 124209 | | || | | | |||| |||| ||| |||||||| ||| ||||||| Sbjct 15983 TACTCTCAAGGCCAAG---ATCG-CGCAGACCGGCGTGCGTAACAGTCTGCTGGTGGCAC 15928 Query 124210 ACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCA 124269 |||||||||||| | ||| ||| || | || |||||| | ||||||||| | || Sbjct 15927 CCATGCCGACGGCCAGCACGAGTCAGATCCTGGGCTTCAACGAGTGCTTCGAGCCCTACA 15868 Query 124270 CTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATT 124329 | || | ||| ||| || || || || ||||| || || || | || | | Sbjct 15867 CGTCGAACATCTACTCGCGTCGTGTTTTGGCGGGCGAGTTCCAGGTCGTCAACCCTTGGC 15808 Query 124330 TGGTGGACGACTTGGTGG--CGTTAAATTTGTACGATGAAAACATGCGCAACGAAATTAT 124387 || | | |||||||| | | |||| || || |||||| ||| || || Sbjct 15807 TGCTCAAGGACTTGGTCGACCTGGGTCTTTGGTCG--GATAACATGAAGAACCGCATCAT 15750 Query 124388 TGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAAGCAACTGTA 124447 ||||| ||||| || ||| |||| | || || | | || ||||| ||||| Sbjct 15749 TGCGGATGGTGGATCGGTCCAGAACATCCCCAACATCCCCGCAGACATCAAGAGCCTGTA 15690 Query 124448 CAAAACCGTGTGGGAAAT 124465 ||| ||||||||||| || Sbjct 15689 CAAGACCGTGTGGGAGAT 15672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451974090993920