Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq20 123 3e-23
seq155 118 1e-21
>seq20
Length=61044
Score = 123 bits (136), Expect = 3e-23
Identities = 301/447 (67%), Gaps = 18/447 (4%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| ||| | || ||| ||||||
Sbjct 3824 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGCGAGATCGACTCCAT 3765
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATT---GTTGGC-ACCCCAATCTGTTTGAG 127344
|| || || ||||| | | || | | || |||| | | | | | ||
Sbjct 3764 GAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCGCGTTGCCGAGAGCGACC------AG 3711
Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404
|||||| || | ||| |||| ||||||| ||||| | |||||||| |||| |||
Sbjct 3710 GAGACGGTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGAGTTCATGCCGAGGAG 3651
Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464
| ||| ||||| || || | |||| ||||||| || ||||| || | |||
Sbjct 3650 GGCACAGGGGAGGGCATCGGTCAAGAACTCCTTCTCGATTGAGACAGCCTCAACGATGAT 3591
Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA-CAG-C 127521
| | | | | | | | || | ||| | | || |||||| | | ||| |
Sbjct 3590 GTCCTCGACAACTTTCTTGCTGGGGCGGTTGT-TGAGGTGAGAGAAGAG--CAAGCAGGC 3534
Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581
|| || |||||||||||||||||| |||||||| || ||||||||| ||||| ||
Sbjct 3533 GAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGACCGGG 3474
Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641
||| || || |||||||| | ||| || || | | ||| || || |||||||| || ||
Sbjct 3473 CATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAAGAAAATACC 3414
Query 127642 CTCCACACACGCGAACGCAAATAGACG 127668
||| || ||||| |||| |||||
Sbjct 3413 CTCAACGGCGGCGAAAGCAACGAGACG 3387
>seq155
Length=53423
Score = 118 bits (130), Expect = 1e-21
Identities = 218/315 (69%), Gaps = 11/315 (3%)
Strand=Plus/Plus
Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCC-ACAGCCTCTGAGAGCCCTGGTGCCTT 116717
|||||| ||| ||||| |||||||| || || ||| | || | || ||||| ||||
Sbjct 16670 TACTTTTCGTAAAGGGCATCAAACTCGTCTCCGTACA-CATCGGCCAGTCCTGGAGCCTC 16728
Query 116718 ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 116777
| || |||||||| | ||| | ||| ||||||||||||||||||| ||||| ||
Sbjct 16729 GTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGG 16788
Query 116778 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 116837
||||||| || |||| ||||| || | ||||||| | || || || |||
Sbjct 16789 AGTCCAGAGAGCATAGAAAAGATCACGGGCTCTCACTTCTTCCTTGCCGTGGTTTTTACG 16848
Query 116838 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC 116896
| ||||| || || | || ||||| |||||| || ||||| || | |||| | |||
Sbjct 16849 GAGATCCAAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACC 16908
Query 116897 C-----CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951
| |||| ||| |||||| ||||||| || || ||| || || || ||
Sbjct 16909 CGGACGCTTG---TTGCCACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAG 16965
Query 116952 CATTGGAATGATACC 116966
||| |||| ||||||
Sbjct 16966 CATAGGAACGATACC 16980
Score = 116 bits (128), Expect = 5e-21
Identities = 498/778 (64%), Gaps = 23/778 (3%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||| | |||||| ||||| |||||||| ||| |||| ||| || ||| |
Sbjct 15855 TAGATGTTCGACGTGTAGGGCTCGAAGCACTCGTTGAAGCCCAGGATCTGACTCGTGCTG 15914
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || ||||||||||||| || || ||||| || | || | | || ||
Sbjct 15915 GCCGTCGGCATGGGTGCCACCAGCAGACTGTTACGCACGCCGGTCTGCGCGATCTTGGCC 15974
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TCCCACATATCAAACTGGAG 116081
||||| | |||||||| || || | || | |||||||| ||| |||||||
Sbjct 15975 TTGAGAGTATCCCAGTCCCAGA-GATCGGTGGGGGTACGATCCCACATGTCATACTGGAG 16033
Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141
||||| |||||| | || || ||||| | || || || | || | ||| || |
Sbjct 16034 AATACCCTGGGACACGGGAGAGCCCTCGTACGTTTCGTAGGTACCGTGTTCCTTGGCAAG 16093
Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201
|| ||| || || ||| |||| || || ||||| || || | ||||
Sbjct 16094 CTCCGAGGAAGCAGTCAGAGCTCCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTG 16153
Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261
||| |||||| || ||||| | || || | || || |||| || ||||| |
Sbjct 16154 CTTTGCCTCGGGCGAGTCAAAGGGCAGGCGCAAGGCAAGGAAAGCATCGGCCAGACCGTT 16213
Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 116318
||| ||||| |||| || || || | | ||| ||| || ||| || ||
Sbjct 16214 GACTCCGAGAGCAATAGGCCGGTGACGGAAGTTACTCTTCTTGGC---CTCGGGAACAGG 16270
Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378
||| | || | ||||| | | | || || || | ||||| || ||| ||
Sbjct 16271 ATAGTAGTTGATGTCGATGATCTTGTTCAGGTTGCGAACCAAAACCTGAACGACTTCGTG 16330
Query 116379 AAGCTTT------TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 116432
|||||| ||||| || || | || | ||| || || |||| |||||
Sbjct 16331 AAGCTTGCCAAAGTCGTATTCGCCACGGGCAG---CGTCAACGA---ACGTAGGGAGGGC 16384
Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492
| || |||| || || |||| | ||| || | | ||||||| | |||||| ||
Sbjct 16385 AAGAGAAGCCAAGTTGCAGACAGCGACCTCGTCGGGAGCGCTGTACTCAACAATTTCAGT 16444
Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552
|| | || || || || |||||||||||||| || || ||| |||| || ||
Sbjct 16445 GCATAGGTTGGAGCTGCGGATAGTGCCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGC 16504
Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612
||| ||||| |||||| | || | || ||||| || || | || ||||||||| | |||
Sbjct 16505 ATCTTTGTACAGCATAAAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGAATAGCATACCA 16564
Query 116613 TA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669
| | || | | || | | ||| | | |||| ||||||| ||||||| ||||||
Sbjct 16565 AAGCTTCTGAGCCTTG-ATTGTGCGGCGGCCTCGGCCCTCCTTCTCGTAC-CTGTGTA 16620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613467690136320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |