Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq430 143 3e-29 seq245 114 1e-20 seq768 95.1 1e-14 >seq430 Length=18842 Score = 143 bits (158), Expect = 3e-29 Identities = 162/213 (76%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| ||||||||||| ||||| |||||||| || || || || |||| ||| Sbjct 6503 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCG 6562 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| ||||| || |||| ||||||||||||| || | || |||||| || Sbjct 6563 AGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGA 6622 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| |||||| ||| | | | |||||| ||| |||||| |||| |||||| || Sbjct 6623 ATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCT---TTCCACCTCCAACGTGATCGT 6678 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| ||||| Sbjct 6679 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711 Score = 131 bits (144), Expect = 2e-25 Identities = 132/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| | || || ||||||||||| ||||| Sbjct 7270 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 7329 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||| || | || | || |||||||||| |||||| |||||| ||| Sbjct 7330 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 7388 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | ||||||||||| || || || | |||||||| ||||| || Sbjct 7389 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 7437 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| |||||||| ||||| ||||| |||||||| | || || | |||||| ||||| || Sbjct 6748 CTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAA 6807 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||||| || | || |||||| || |||||| |||| | | Sbjct 6808 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTT 6867 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| ||| ||||| |||| |||||| ||||| || || || || || Sbjct 6868 ATCGATGGTGTCTGAACTC---TCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTT 6924 Query 46579 AACAAAGATTTGCAT 46593 || ||||||||||| Sbjct 6925 GACGAAGATTTGCAT 6939 Score = 116 bits (128), Expect = 4e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||||| || ||||| | || || |||||||| || ||||| Sbjct 6977 TCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAG 7036 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| |||||||| || | || | | |||||||||| ||||||| ||| | | Sbjct 7037 ATCAAACGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACATTG 7096 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||||| ||||| || || | |||||||| || || || || || || || Sbjct 7097 TCGATGGTGTCGCTGGATTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGAC 7155 >seq245 Length=44002 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || || |||||||| || ||||| | Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | ||||||||||||| || | || |||||||||| |||||| ||||| ||| | Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 3903 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 3902 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3843 Query 46583 AA 46584 || Sbjct 3842 AA 3841 >seq768 Length=20780 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| || | || |||||| ||||| |||||||| || ||||| || || Sbjct 8396 CGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCG 8455 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || |||||||| || ||||| |||| ||||||||||||| || | | ||||||| Sbjct 8456 TCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTG 8515 Query 46499 TCCAT 46503 || || Sbjct 8516 TCTAT 8520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565201998647040