Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq430 143 3e-29
seq245 114 1e-20
seq768 95.1 1e-14
>seq430
Length=18842
Score = 143 bits (158), Expect = 3e-29
Identities = 162/213 (76%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| ||||||||||| ||||| |||||||| || || || || |||| |||
Sbjct 6503 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCG 6562
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| ||||| || |||| ||||||||||||| || | || |||||| ||
Sbjct 6563 AGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGA 6622
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| ||| | | | |||||| ||| |||||| |||| |||||| ||
Sbjct 6623 ATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCT---TTCCACCTCCAACGTGATCGT 6678
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || || || ||||| |||||
Sbjct 6679 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 131 bits (144), Expect = 2e-25
Identities = 132/169 (78%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| |||||||| | || || ||||||||||| |||||
Sbjct 7270 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 7329
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||| || | || | || |||||||||| |||||| |||||| |||
Sbjct 7330 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 7388
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | ||||||||||| || || || | |||||||| ||||| ||
Sbjct 7389 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 7437
Score = 118 bits (130), Expect = 1e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| |||||||| ||||| ||||| |||||||| | || || | |||||| ||||| ||
Sbjct 6748 CTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAA 6807
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||||||||||| || | || |||||| || |||||| |||| | |
Sbjct 6808 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTT 6867
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| ||| ||||| |||| |||||| ||||| || || || || ||
Sbjct 6868 ATCGATGGTGTCTGAACTC---TCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTT 6924
Query 46579 AACAAAGATTTGCAT 46593
|| |||||||||||
Sbjct 6925 GACGAAGATTTGCAT 6939
Score = 116 bits (128), Expect = 4e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| ||||||||||| || ||||| | || || |||||||| || |||||
Sbjct 6977 TCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAG 7036
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| |||||||| || | || | | |||||||||| ||||||| ||| | |
Sbjct 7037 ATCAAACGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACATTG 7096
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||||| ||||| || || | |||||||| || || || || || || ||
Sbjct 7097 TCGATGGTGTCGCTGGATTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGAC 7155
>seq245
Length=44002
Score = 114 bits (126), Expect = 1e-20
Identities = 136/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || || |||||||| || ||||| |
Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
| | ||||||||||||| || | || |||||||||| |||||| ||||| ||| |
Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 3903
Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || || || | || ||||| || |||||||| || || ||
Sbjct 3902 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3843
Query 46583 AA 46584
||
Sbjct 3842 AA 3841
>seq768
Length=20780
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| |||||| || | || |||||| ||||| |||||||| || ||||| || ||
Sbjct 8396 CGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCG 8455
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || |||||||| || ||||| |||| ||||||||||||| || | | |||||||
Sbjct 8456 TCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTG 8515
Query 46499 TCCAT 46503
|| ||
Sbjct 8516 TCTAT 8520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565201998647040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |