Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq430 118 1e-21
seq245 118 1e-21
seq768 98.7 1e-15
>seq430
Length=18842
Score = 118 bits (130), Expect = 1e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313
|||| || || ||||| || || ||||||||| | || || || ||| ||||| | |
Sbjct 7157 TCGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCCAGCGACACCATCG 7098
Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373
| | | || || |||| ||||| ||||| || || | || || ||||| | |
Sbjct 7097 ACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGTTTGA 7038
Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433
| | ||| || || |||||||| || | ||||||||| ||||||||||||||||||||
Sbjct 7037 TCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAAAAGG 6978
Query 38434 AAGCGACGCTGCATTTGGTGCTGCG 38458
|| | ||||| || ||||| |||||
Sbjct 6977 AATCCACGCTCCACTTGGTTCTGCG 6953
Score = 105 bits (116), Expect = 7e-18
Identities = 128/171 (75%), Gaps = 4/171 (2%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||| ||||||||| |||| |||||| | | ||||| | | | |||| | ||
Sbjct 7439 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACG--TCAA 7382
Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383
|| || |||| ||||| ||||| || ||| | || || ||||| || || | ||| ||
Sbjct 7381 GAGCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAGCAGCGTCTGATCTTCGCTGG 7322
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
||| ||||| || || | ||||| || ||||||||||||||| |||||
Sbjct 7321 CAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATCCAGAAGGA 7271
Score = 86.0 bits (94), Expect = 6e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || ||||| | || || || | |
Sbjct 6711 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATCACGTTGGAGGTGGAAAGCTCG 6652
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | | | |||| || || | || || ||||| || || |||||||
Sbjct 6651 GACA-CGATCGACAACGTCAAGAGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCA 6593
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || || || ||||| || |||| || || ||| ||||||||
Sbjct 6592 GCAGCGTCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGACGGACGCTCTCGGACTACAA 6533
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| |||||||| |||| || ||
Sbjct 6532 CATCCAGAAGGAGAGTACGCTGCACCTGGTCCTCCG 6497
Score = 82.4 bits (90), Expect = 8e-11
Identities = 136/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || ||||| ||||| | || || ||| |
Sbjct 6939 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAAACGATCACGCTGGAGGTGGAGAGTTCA 6880
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | |||| || |||| || || ||||| || || ||||||
Sbjct 6879 GACACCATCGATAACG--TGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCCGACC 6822
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| | || | || || || ||| |||| || | ||||| || ||| ||||
Sbjct 6821 AGCAGCGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGTCCGATTACA 6762
Query 38422 ACATCCAAAAGGA 38434
|||||||||| ||
Sbjct 6761 ACATCCAAAAAGA 6749
>seq245
Length=44002
Score = 118 bits (130), Expect = 1e-21
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | |
Sbjct 3841 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 3900
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| ||||| |||||| ||||||| ||||| ||
Sbjct 3901 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCT 3959
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| || || ||||| || || | |||||||| | ||||||||||||||| ||
Sbjct 3960 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 4019
Query 38432 GG 38433
||
Sbjct 4020 GG 4021
>seq768
Length=20780
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||| ||| ||||||| ||||| || || | ||| || || ||||||||
Sbjct 8517 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAG 8458
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| || || || |||||||||||||| ||||| |||| || || ||||||||
Sbjct 8457 GACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTGGTGCTG 8398
Query 38457 CG 38458
||
Sbjct 8397 CG 8396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500140588871680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |