Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq155 201 1e-46
seq20 95.1 1e-14
seq769 91.5 2e-13
seq1401 82.4 9e-11
>seq155
Length=53423
Score = 201 bits (222), Expect = 1e-46
Identities = 478/715 (67%), Gaps = 13/715 (2%)
Strand=Plus/Plus
Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG 110574
||||| ||| | | | ||||| || | |||||||||||| | || || |||| |
Sbjct 16670 TACTTTTCGTAAAGGGCATCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCG 16729
Query 110575 TCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAACAGGTCA 110631
| ||| |||||||||| ||| | |||| | ||||||||| |||||||||||||||
Sbjct 16730 TTGGGGCAGAAGAGGGTCCAGT---CACCGTTGGCCTCAACCCGCTTCATGAACAGGTCC 16786
Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691
||| |||| | || ||||||| |||||| | | ||||| | || |||||
Sbjct 16787 GGAGTCCAGAGAGCATAGAAAAGATCACGGGCTCTCACTTCTTCCTTGCCGTGGTTTTTA 16846
Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751
|| || ||||| || || | || |||||||||||| || || ||||||| ||||| |
Sbjct 16847 CGGAGATCCAAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCA 16906
Query 110752 CCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808
||| ||| || |||||| |||||| || || ||| ||||| || | ||||
Sbjct 16907 CCCGGACGCTTGTTGCCACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGC 16966
Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868
||||||| || || | ||| ||| || || || | ||| |||| | | |||||
Sbjct 16967 ATAGGAACGATACCGTTGGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGG 17026
Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGT 110927
|| ||| | | | ||| ||||||||||| ||| || ||||| ||| |
Sbjct 17027 ATTCGGTGAACGTTGAGACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCT-T 17085
Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987
|| || |||||||||||||||| || |||| | | | || ||||| || |
Sbjct 17086 CAGAGTGTCATAAATACCATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGGC 17145
Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047
| |||||| | || ||||| |||||||| || || || | ||||| ||||
Sbjct 17146 AAGCTGAGGCTGGGGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTT 17205
Query 111048 TTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAAT 111107
||||||||| || || || |||| || | ||| | || || |||||||
Sbjct 17206 CTGGGACATCAAGTGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAAC 17265
Query 111108 GGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAG 111167
||| || ||||| | || || ||||| || | ||||||||| || ||| | ||
Sbjct 17266 GGCCACACGCATCAGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAG 17325
Query 111168 GTA-ACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
||| || | || |||||||||| |||||| | | | ||||||||| ||
Sbjct 17326 GTACGATCGT-TCGAGGGTCTTGAAGCCAAAGAAGTTGTAGTTGAAATCACGGTC 17379
>seq20
Length=61044
Score = 95.1 bits (104), Expect = 1e-14
Identities = 302/461 (66%), Gaps = 17/461 (4%)
Strand=Plus/Minus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|||||||| || | ||| |||||||| || ||||||||| | || ||||| |||||
Sbjct 3823 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGCGAGATCGACTCCATG 3764
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326
||||| || || || ||| || || | | |||| | | | ||| |||||
Sbjct 3763 AAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCGCGTTGCCGAGAGCGAC-CAGGAGACG 3705
Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386
|| | || ||||||| || | | ||||| | || ||||| || | ||| |||
Sbjct 3704 GTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGAGTTCATGCCGAGGAGGGCACA 3645
Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGT- 119445
||||| |||||| | ||| | ||||||||| ||||| || |||||| ||
Sbjct 3644 GGGGAGGGCATCGGTCAAGAACTCCTTCTCGATTGAGACAGCCTCA---ACGATGATGTC 3588
Query 119446 ---GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACG---GCAA 119499
|| | ||||| | ||| | || | ||| | | | || | | || |
Sbjct 3587 CTCGACAACTTTCTTGC--TGGGGCGGTTGTT--GAGGTGAGAGAAGAGCAAGCAGGCGA 3532
Query 119500 ATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCA 119559
| || || || || || || |||||||||||||| || |||| || || ||||
Sbjct 3531 AGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCA 3472
Query 119560 TGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCT 119619
| || || | ||||| ||||||||||||| | |||| || || ||||| || ||||
Sbjct 3471 TCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAAGAAAATACCCT 3412
Query 119620 CCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA 119660
| || ||||||||| | ||||| ||| ||||||||
Sbjct 3411 CAACGGCGGCGAAAGCAACGAGACG-AGAGCCGAAGGTCGA 3372
>seq769
Length=11537
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771
|||| ||||||||| ||||||||||||||||| |||||||||||||| || |||||| ||
Sbjct 444 TCTTGTAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCC 503
Query 136772 CCGTTGGGAACAGCTTTT 136789
||| |||| || ||||
Sbjct 504 TCGTCGGGACCATTTTTT 521
>seq1401
Length=8537
Score = 82.4 bits (90), Expect = 9e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 11670 CTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTG-GTTGGCACGTG 11728
|||| ||| | || || | |||||||||||| | ||| | ||| || ||| |||| |
Sbjct 7473 CTTCGCACCTATCGCATCCAACTCATCGATGAAAATGAT-CGCGGGTGACTTGCCACGGG 7415
Query 11729 CCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788
| || | || | ||||| |||||||| || |||||||| ||| ||| |||| |||| |
Sbjct 7414 CTTGGGCAAACAAGTCACGGACACGCTTGGCACCAACACCCACGTACACCTCATCGAATT 7355
Query 11789 TTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848
| |||| | | |||||| || | |||||| || | ||| || || || |
Sbjct 7354 CAGATCCAGACATGTAGAAGAAGGGGACGCCGGCCTCACCCGCAACGGCACGGGCAAGAA 7295
Query 11849 GAGTCTTACCCGTACCAGG 11867
||||||| || ||||| ||
Sbjct 7294 GAGTCTTTCCGGTACCGGG 7276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588938069945600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |