Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq235 125 6e-24 >seq235 Length=28033 Score = 125 bits (138), Expect = 6e-24 Identities = 404/629 (64%), Gaps = 21/629 (3%) Strand=Plus/Plus Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838 ||||||| | | ||||| || || ||| || | || || ||||| || || | ||| Sbjct 22183 GGCTCCCGCGCCAGCTGCTCCTGCAACGGCTCGATATGGTCGAGGTACACATGGGTGTCG 22242 Query 29839 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29898 |||| || |||| || || || | || | | | ||||||||| ||| | |||| Sbjct 22243 CCCATGGAGTGGGTGAAGGTGCCGGGATGCAGGTCCGCGGCGTGAGCCAGCATATGCGTG 22302 Query 29899 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 29958 || || | ||| ||||||||| ||||| | ||||| | | || | || | |||| Sbjct 22303 AGCAGGGCGTACGAGGCGATGTTGAAGGGCAGGCCGAGGGCGGTATCGACGGAGCGCTGG 22362 Query 29959 TAGAGCTGACACGAGAGCT----CT-----------CCGTCGCTCA------CGTAAAAC 29997 || | | || ||||| | || |||||| | |||| ||| Sbjct 22363 TACATGAGGCAGGAGAGATGGCCCTTGGAGCCCGGACCGTCGGGGAAGGAGACGTAGAAC 22422 Query 29998 TGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30057 || | ||||||| || || || ||||| || | ||| ||||||||| ||| Sbjct 22423 TGGGCGAACATGTGGCAGGGCGGCAGGGCCATTAGCTTAAGGTCGGCGGGGTTCCAAGCG 22482 Query 30058 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 30117 | || ||||||||| | ||| | ||||||| | | || |||| ||| |||| Sbjct 22483 CTCATGATGATGCGGCGGTCGTAGGGGTTGTGTTTCAGCTTGTGCACGACGTCCGCCAGC 22542 Query 30118 TGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGC 30177 || || || ||| |||| |||||| | | ||| ||| || ||||| ||| Sbjct 22543 TGGTCGACGCCCTGTCCCGTGTAGTCGGTGTTGGCGTCTACGTAGGGCGCGCCGAAGTGC 22602 Query 30178 CTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTC 30237 | ||||||||| ||||| || || || ||||| || | || | ||| ||| ||| | Sbjct 22603 CGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACCTCGCGGTGTCCGAGGCCGACC 22662 Query 30238 TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 30297 ||||| | || || | | ||||| ||||||||||||| | || ||||||||||| Sbjct 22663 TTGTCGAGGAACTCGCGGCTGCCGTTCCCGTCCCAGATCTTGATGCCGTTCTCGGAGAGG 22722 Query 30298 TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAA 30357 ||| |||| | || || |||||| ||||| || | | ||| | | Sbjct 22723 GGAAGGGACGATGTGCAGCCGGAGATGAACCATAGCAGTTCGGCGATCACGCCGCGCAGG 22782 Query 30358 AAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 || || | ||| || ||||||||||| || Sbjct 22783 AACACGCGCTTTGTGGTGAGGAGGGGTAA 22811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408591942900896