Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq235 125 6e-24
>seq235
Length=28033
Score = 125 bits (138), Expect = 6e-24
Identities = 404/629 (64%), Gaps = 21/629 (3%)
Strand=Plus/Plus
Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838
||||||| | | ||||| || || ||| || | || || ||||| || || | |||
Sbjct 22183 GGCTCCCGCGCCAGCTGCTCCTGCAACGGCTCGATATGGTCGAGGTACACATGGGTGTCG 22242
Query 29839 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29898
|||| || |||| || || || | || | | | ||||||||| ||| | ||||
Sbjct 22243 CCCATGGAGTGGGTGAAGGTGCCGGGATGCAGGTCCGCGGCGTGAGCCAGCATATGCGTG 22302
Query 29899 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 29958
|| || | ||| ||||||||| ||||| | ||||| | | || | || | ||||
Sbjct 22303 AGCAGGGCGTACGAGGCGATGTTGAAGGGCAGGCCGAGGGCGGTATCGACGGAGCGCTGG 22362
Query 29959 TAGAGCTGACACGAGAGCT----CT-----------CCGTCGCTCA------CGTAAAAC 29997
|| | | || ||||| | || |||||| | |||| |||
Sbjct 22363 TACATGAGGCAGGAGAGATGGCCCTTGGAGCCCGGACCGTCGGGGAAGGAGACGTAGAAC 22422
Query 29998 TGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30057
|| | ||||||| || || || ||||| || | ||| ||||||||| |||
Sbjct 22423 TGGGCGAACATGTGGCAGGGCGGCAGGGCCATTAGCTTAAGGTCGGCGGGGTTCCAAGCG 22482
Query 30058 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 30117
| || ||||||||| | ||| | ||||||| | | || |||| ||| ||||
Sbjct 22483 CTCATGATGATGCGGCGGTCGTAGGGGTTGTGTTTCAGCTTGTGCACGACGTCCGCCAGC 22542
Query 30118 TGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGC 30177
|| || || ||| |||| |||||| | | ||| ||| || ||||| |||
Sbjct 22543 TGGTCGACGCCCTGTCCCGTGTAGTCGGTGTTGGCGTCTACGTAGGGCGCGCCGAAGTGC 22602
Query 30178 CTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTC 30237
| ||||||||| ||||| || || || ||||| || | || | ||| ||| ||| |
Sbjct 22603 CGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACCTCGCGGTGTCCGAGGCCGACC 22662
Query 30238 TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 30297
||||| | || || | | ||||| ||||||||||||| | || |||||||||||
Sbjct 22663 TTGTCGAGGAACTCGCGGCTGCCGTTCCCGTCCCAGATCTTGATGCCGTTCTCGGAGAGG 22722
Query 30298 TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAA 30357
||| |||| | || || |||||| ||||| || | | ||| | |
Sbjct 22723 GGAAGGGACGATGTGCAGCCGGAGATGAACCATAGCAGTTCGGCGATCACGCCGCGCAGG 22782
Query 30358 AAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
|| || | ||| || ||||||||||| ||
Sbjct 22783 AACACGCGCTTTGTGGTGAGGAGGGGTAA 22811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408591942900896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |