Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq430 113 3e-20
>seq430
Length=18842
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||||||||| || |||||||| || ||| | || | || ||||||||||||||||||||
Sbjct 6748 CTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAA 6807
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| ||||| || || | || | ||||||||| || ||||| || ||
Sbjct 6808 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTT 6867
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | | ||||| ||||||||||| ||| ||||||||||| || | ||| || ||
Sbjct 6868 ATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGAC 6927
Query 48755 AAAAATCTGCAT 48766
|| || |||||
Sbjct 6928 GAAGATTTGCAT 6939
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| || ||||| ||||| || || || ||||| || || || | || |||| ||
Sbjct 6503 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCG 6562
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||||||||||||||| ||||| ||||| || || | || | ||||||||| || |
Sbjct 6563 AGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGA 6622
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | || || |||||||||| ||| ||||| ||
Sbjct 6623 ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAACGTGATCGTCTTG 6682
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | || || || || ||||||||
Sbjct 6683 CCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380913680928096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |