Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq430 113 3e-20 >seq430 Length=18842 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||||||||| || |||||||| || ||| | || | || |||||||||||||||||||| Sbjct 6748 CTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAA 6807 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| ||||| || || | || | ||||||||| || ||||| || || Sbjct 6808 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTT 6867 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | ||||| ||||||||||| ||| ||||||||||| || | ||| || || Sbjct 6868 ATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGAC 6927 Query 48755 AAAAATCTGCAT 48766 || || ||||| Sbjct 6928 GAAGATTTGCAT 6939 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || ||||| ||||| || || || ||||| || || || | || |||| || Sbjct 6503 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCCTCG 6562 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||||||||| ||||| ||||| || || | || | ||||||||| || | Sbjct 6563 AGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGA 6622 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || |||||||||| ||| ||||| || Sbjct 6623 ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAACGTGATCGTCTTG 6682 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || || |||||||| Sbjct 6683 CCAGTGAGGGTCTTGACGAAGATCTGCAT 6711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380913680928096