Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq155 154 3e-32
seq20 127 4e-24
>seq155
Length=53423
Score = 154 bits (170), Expect = 3e-32
Identities = 455/693 (66%), Gaps = 14/693 (2%)
Strand=Plus/Plus
Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001
||| || |||| |||||| || |||||| | ||| |||| |||||| | | |||
Sbjct 16678 GTAAAGGGCAT--CAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGG 16735
Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061
|| | || |||||| |||| | | |||| || |||||| |||||||| ||||
Sbjct 16736 CAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAG 16795
Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121
|| || | || ||||| | || | | || ||| ||||| |||||| | ||||||
Sbjct 16796 AGAGCATAGAAAAGATCACGGGCTCTCACTTCTTCCTTGCCGTGGTTTTTACGGAGATCC 16855
Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181
|| || || || | || | |||||| ||||||||||||| || | ||| || || |||
Sbjct 16856 AAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCGGACGC 16915
Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTAC 222240
|||||||||||||| | || ||| | ||| | |||||| | || || | || ||
Sbjct 16916 TTGTTGCCACCCTGGT-CAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAAC 16974
Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTT 222297
| |||||||| ||||||||| || |||||| | || || | | |||
Sbjct 16975 GATACCGTTGGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGATTCGGTG 17034
Query 222298 ACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGT 222357
| | || | ||||||||||| ||| || |||||||| || || |||| |||||
Sbjct 17035 A-ACGTTGAGA--CCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGT 17091
Query 222358 GTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417
||| || || || || ||||||||| | | | ||| || || || | | |||
Sbjct 17092 GTCATAAATACCATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGGCAAGCTG 17151
Query 222418 AGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGA 222477
|| | || | | ||| || ||||| ||||| || || || ||||| | ||
Sbjct 17152 AGGCTGGGGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGGA 17211
Query 222478 CATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCA 222537
||||| | || ||||| | | | | |||| | || || || || | |||
Sbjct 17212 CATCAAGTGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCAC 17271
Query 222538 TCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCT--GGAGAGCAGGTAC 222595
| ||| || | ||| || | ||| || ||| || | || |||||||||
Sbjct 17272 ACGCATCAGCAGATGCTGAGGACGCTCAGCA--ACCTTTCCATCTACCCGCAGCAGGTAC 17329
Query 222596 GATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG 222628
||| ||| || |||||||| |||||| |||||
Sbjct 17330 GATCGTTCGAGGGTCTTGAAGCCAAAGAAGTTG 17362
Score = 107 bits (118), Expect = 4e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || |||| | || | | | ||| | ||| || ||| | ||
Sbjct 15815 GTTGACGACCTGGAACTCGCCCGCCAAAACACGACGCGAGTAGATGTTCGACGTGTAGGG 15874
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||| ||||||||||||| ||||||||| || ||||||||||||||
Sbjct 15875 CTCGAAGCACTCGTTGAAGCCCAGGATCTGACTCGTGCTGGCCGTCGGCATGGGTGCCAC 15934
Query 221236 CAGCAGACTGTTGCGCA 221252
|||||||||||| ||||
Sbjct 15935 CAGCAGACTGTTACGCA 15951
>seq20
Length=61044
Score = 127 bits (140), Expect = 4e-24
Identities = 336/516 (65%), Gaps = 11/516 (2%)
Strand=Plus/Plus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTAC 25868
||| ||||||| | |||||| |||||||| |||||| | || || | | | ||
Sbjct 3318 CCCTGCATCAACAAGAAGGCTGAATGGGCCATCCGATGGATCCA-AGACAAGGAGTCGAC 3376
Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928
|| ||| || || || || || || || || ||||| || || ||| ||| || ||
Sbjct 3377 CTTCGGCTCTCGTCTCGTTGCTTTCGCCGCCGTTGAGGGTATTTTCTTCTCCGGGTCTTT 3436
Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988
||| ||||||| ||||| ||| || || |||||||| || ||| || |||||
Sbjct 3437 TGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTGATGCCCGGTCTCACCTTCTCGAACGA 3496
Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048
||||||| | |||||||||||||||| || || |||||| |||||| | | ||
Sbjct 3497 GCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTCGCCTGCTTGCTCTTCTC---TCA 3553
Query 26049 CTTGCTCCACAA--ACCTTCTCAAGAGA-CCGTCTACAGTATCATCAAAGAGGCTGTGGA 26105
| ||| |||| || ||||| | ||| | |||||| ||||||||
Sbjct 3554 C---CTCAACAACCGCCCCAGCAAGAAAGTTGTCGAGGACATCATCGTTGAGGCTGTCTC 3610
Query 26106 GATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAG 26165
|||||||||||||| | ||||||||| ||
Sbjct 3611 AATCGAGAAGGAGTTCTTGACCGATGCCCTCCCCTGTGCCCTCCTCGGCATGAACTCCAA 3670
Query 26166 ACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGC 26225
|| ||| |||| ||||| |||| ||||| |||| ||| ||| | || || |||
Sbjct 3671 CCTGATGTGCCAGTACATCGAGTTCGTGGCTGACCGTCTCCTGGTCGCTCTCGGCAACGC 3730
Query 26226 CAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAA 26285
| || || | | | ||||| |||||||| ||||| || ||| ||| || ||
Sbjct 3731 GAAGTACTTCAATGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCTGGTAA 3790
Query 26286 GACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||||||||||| || ||| | ||||| ||||| ||
Sbjct 3791 GACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 3826
Score = 86.0 bits (94), Expect = 1e-11
Identities = 177/260 (68%), Gaps = 9/260 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | || ||||||||| || || || ||||||
Sbjct 2916 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCTGAGGAAATCGATCTG 2975
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTT--TCTC 25590
| ||||| || ||| ||| || || || | | ||||||| | || ||||
Sbjct 2976 TCGAAGGATTTGCACGATTGGAACAACCGC-CTGAACGACGACGAGCGCTACTTCATCTC 3034
Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650
| ||| |||| ||||| || ||||| ||||| || || || ||||| ||| |||
Sbjct 3035 TCG--CGTTCTGGCTTTCTTCGCCGCCTCAGATGGCATTGTCAATGAGAACCTGCTGGAG 3092
Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710
|||||| | | || || ||| | ||||| ||||||||||| ||||||||
Sbjct 3093 CGATTCAGCGGAGAGGTTCAGGTCCCCGAGGCTCGTTGTTTCTACGGGTTCCAGATCATG 3152
Query 25711 ATCGAAAATGTGCACTCTGA 25730
||||| || | ||||| ||
Sbjct 3153 ATCGAGAACATCCACTCGGA 3172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928784982394880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |