Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq155 154 4e-32 seq20 105 2e-17 seq417 104 7e-17 seq78 98.7 3e-15 >seq155 Length=53423 Score = 154 bits (170), Expect = 4e-32 Identities = 375/565 (66%), Gaps = 5/565 (1%) Strand=Plus/Plus Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTA 155994 ||| | |||||||||||| || | || | | ||| || | | |||||| || || || | Sbjct 16792 CCAGAGAGCATAGAAAAGATCACGGGC-TCTCACTTCTTCCTTGCCGTGGTTTTTACGGA 16850 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC-- 156052 | || |||||||| | ||| | || ||||||||||| ||||| ||| ||| Sbjct 16851 GATCCAAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCG 16910 Query 156053 -ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 | | | ||||||||||| || |||||||||||||| || ||||| |||| ||||||| Sbjct 16911 GACGCTTGTTGCCACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAG 16970 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 ||| ||||| ||||||| || |||||||||| ||| | || |||| | || | Sbjct 16971 GAACGATACCGTTGGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGATTC 17030 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 |||| | || || |||||||| | || || || || ||| ||| | || Sbjct 17031 GGTGAACGTTGAGACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAG 17090 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 | | ||||||| ||||| || || | ||| | || ||||||| | | Sbjct 17091 TGTCATAAATACCATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGGCAAGCT 17150 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 |||| | || ||||| || ||||| || || || | ||||| | || || || | | Sbjct 17151 GAGGCTGGGGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGG 17210 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411 |||| | | || ||||| | | ||| | || || || |||| | | | Sbjct 17211 ACATCAAGTGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCA 17270 Query 156412 CCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATG 156471 | | |||| || ||||||||||||||| ||| | |||||| | ||||| ||||| | Sbjct 17271 CACGCATCAGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACG 17330 Query 156472 CGCGTTCCAGAGTTTTAAACCCGAA 156496 ||||| || || || || || || Sbjct 17331 ATCGTTCGAGGGTCTTGAAGCCAAA 17355 Score = 87.8 bits (96), Expect = 5e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||||||| || ||||| ||| ||| ||||| || || ||| ||||| || ||||||| Sbjct 16423 CGCTGTACTCAACAATTTCAGTGCATAGGTTGGAGCTGCGGATAGTGCCCAAGTTCTTCT 16482 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || |||| |||||||| ||||| || || | ||| |||| ||||| ||| Sbjct 16483 GGTTGCTCTTCTTGTTGCAAGCATCTTTGTACAGCATAAAGGGGTTTCCGGTCTCAGTCT 16542 Query 155746 GTGCGTCCAGAAT 155758 | || || ||||| Sbjct 16543 GAGCCTCGAGAAT 16555 >seq20 Length=61044 Score = 105 bits (116), Expect = 2e-17 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 |||| || || || ||||| |||| ||||| || ||||||||| |||||| ||| Sbjct 3316 TTCCCTGCATCAACAAGAAGGCTGAATGGGCCATCCGATGGATCCAAGACAAGGAGTCGA 3375 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 || | |||||||||||||||| || | || ||||| ||||| ||| || | | Sbjct 3376 CCTTCGGCTCTCGTCTCGTTGCTTTCGCCGCCGTTGAGGGTATTTTCTTCTCCGG-GTCT 3434 Query 133557 TCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615 | ||| || || ||||||||||| |||||||| | | || || || || || ||| Sbjct 3435 TTTGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTGATGCCCGGTCTCACCTTCTCGAAC 3494 Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 || || || || | ||||||| || |||||||| || ||| Sbjct 3495 GAGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTCGCC 3536 >seq417 Length=19330 Score = 104 bits (114), Expect = 7e-17 Identities = 174/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 |||||||||||||| ||| | ||||| ||||| ||||| || ||||| |||||||| Sbjct 8660 CGCTGAATATAACCCGTTTCGGCCGTTTTGACAGCAGTATCTATAAGACCCTCACGACCA 8601 Query 302656 CCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAA 302713 ||||||| |||||||| | || || ||| || |||| | | | ||| | || | Sbjct 8600 GCCATAGCGTGGAAGAAGAATTCAGTTGGGGT--GAGACCCCGCAGATATGAGTTTTCCA 8543 Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773 | |||||||| | || || || | |||| ||| || || || |||| || | | | Sbjct 8542 CAAAACCACGAGATTCAGGAGAGTAGTCGTCCTTTGTGAAATGGGGCAATGTACGATATT 8483 Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833 | ||| | || ||||| || || || ||| ||| ||||||| | | |||||| Sbjct 8482 TGAATCCGAAAGGAATACGTTTACCTTCCACGGACTGTTGTCCCACAACAGCAGTCATCT 8423 Query 302834 GCGAAATATT 302843 | |||||||| Sbjct 8422 GAGAAATATT 8413 Score = 100 bits (110), Expect = 8e-16 Identities = 107/141 (76%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||| | | ||||||||||||| | || ||||| |||||||| |||||||| Sbjct 9459 CAAAATTTCCTTGAGACGGGGAACACCAAGCGTGACGTT---CTTGGACGACACACCAGC 9403 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||||||||| || || ||||| | || |||| |||||||||||| || || || | Sbjct 9402 AAAGTGGAAGGTGTTAAGAGTCATCTGTGTAGCCGGCTCACCAATAGACTGGGCAGCCAA 9343 Query 301932 CATACCAACCATTTCTCCTGG 301952 | ||||||||| || || || Sbjct 9342 AACACCAACCATCTCACCGGG 9322 >seq78 Length=51106 Score = 98.7 bits (108), Expect = 3e-15 Identities = 335/510 (66%), Gaps = 14/510 (3%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | |||||||||||||||||||| || ||||| || |||||||| |||||| Sbjct 30554 GCTCCGTGGGCGATCATACAATCACGCTCCATCTCTCCGAACCGGAGACCACCGTCGCGA 30613 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | |||||| | ||||| || || || | | || ||| | ||| || Sbjct 30614 GCACGACCCTCCACGGGCTGTCGCGTCAGGATCTGAGTCGGTCCGCGCGCACGGGCGTGG 30673 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TGC 251662 ||| || | ||||| || |||||||||||| | | || || | ||| | ||| Sbjct 30674 ATCTTGTCGTCGACCATGTGGCGCAGACGCTGGTAGTAGGTCGGTCCCAGGAACACCTGC 30733 Query 251663 TCGAAGGCAT-TTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCA 251721 | | ||| |||| ||| || | |||| |||||||| ||| ||| ||| | Sbjct 30734 GCCAC--CATCTTGCG-TCCCGTGTGGCCGTTGTACATAACCTCGAATCCGCGAGACTGG 30790 Query 251722 TAACCAAGTTTCTGTAGCTCTGAAGCAATATC--ACCAATCTTGAATTTGCTAAAACTGG 251779 || || | | | ||| | || | ||| | | | | ||| | | | || | Sbjct 30791 TAGCCGTGCTCGCGAAGCA--GCCGCGAAATCGAATCGACCGTGACGTCGGTGAAGGGCG 30848 Query 251780 TGCCGTCTCCGTAAAGACCCATTT-GAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGT 251838 || |||| || | | ||||| | | |||| |||| | | ||| ||| Sbjct 30849 TGGCGTCACCCTCGA-ACCCACGGAGCGACGACACCTTGCTGAGCTGACACTCGATCAAG 30907 Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| ||||| || ||||| |||||||| | ||||| || || Sbjct 30908 TGAGCAATGGTCATACGCGACGGAATGGCGTGGGGGTTGATGATCAGATCGGGGTTGAGA 30967 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 || || ||||||||||| |||| || | | || || | || || || ||||| || Sbjct 30968 CCCTCCCGCGTGAAGGGCATGTCCTCTTGC-CGGTAGGTGATACCGATGGTACCCTTCTG 31026 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||||| |||||| || ||||| Sbjct 31027 TCCGTGACGAGAAGCGAACTTGTCTCCAAT 31056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471720445320224