Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq155 154 4e-32
seq20 105 2e-17
seq417 104 7e-17
seq78 98.7 3e-15
>seq155
Length=53423
Score = 154 bits (170), Expect = 4e-32
Identities = 375/565 (66%), Gaps = 5/565 (1%)
Strand=Plus/Plus
Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTA 155994
||| | |||||||||||| || | || | | ||| || | | |||||| || || || |
Sbjct 16792 CCAGAGAGCATAGAAAAGATCACGGGC-TCTCACTTCTTCCTTGCCGTGGTTTTTACGGA 16850
Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC-- 156052
| || |||||||| | ||| | || ||||||||||| ||||| ||| |||
Sbjct 16851 GATCCAAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCCG 16910
Query 156053 -ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111
| | | ||||||||||| || |||||||||||||| || ||||| |||| |||||||
Sbjct 16911 GACGCTTGTTGCCACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAG 16970
Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171
||| ||||| ||||||| || |||||||||| ||| | || |||| | || |
Sbjct 16971 GAACGATACCGTTGGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGATTC 17030
Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231
|||| | || || |||||||| | || || || || ||| ||| | ||
Sbjct 17031 GGTGAACGTTGAGACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAG 17090
Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291
| | ||||||| ||||| || || | ||| | || ||||||| | |
Sbjct 17091 TGTCATAAATACCATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGGCAAGCT 17150
Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351
|||| | || ||||| || ||||| || || || | ||||| | || || || | |
Sbjct 17151 GAGGCTGGGGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTCTGGG 17210
Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411
|||| | | || ||||| | | ||| | || || || |||| | | |
Sbjct 17211 ACATCAAGTGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAACGGCCA 17270
Query 156412 CCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATG 156471
| | |||| || ||||||||||||||| ||| | |||||| | ||||| ||||| |
Sbjct 17271 CACGCATCAGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTACG 17330
Query 156472 CGCGTTCCAGAGTTTTAAACCCGAA 156496
||||| || || || || || ||
Sbjct 17331 ATCGTTCGAGGGTCTTGAAGCCAAA 17355
Score = 87.8 bits (96), Expect = 5e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685
||||||| || ||||| ||| ||| ||||| || || ||| ||||| || |||||||
Sbjct 16423 CGCTGTACTCAACAATTTCAGTGCATAGGTTGGAGCTGCGGATAGTGCCCAAGTTCTTCT 16482
Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745
|||| || |||| |||||||| ||||| || || | ||| |||| ||||| |||
Sbjct 16483 GGTTGCTCTTCTTGTTGCAAGCATCTTTGTACAGCATAAAGGGGTTTCCGGTCTCAGTCT 16542
Query 155746 GTGCGTCCAGAAT 155758
| || || |||||
Sbjct 16543 GAGCCTCGAGAAT 16555
>seq20
Length=61044
Score = 105 bits (116), Expect = 2e-17
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496
|||| || || || ||||| |||| ||||| || ||||||||| |||||| |||
Sbjct 3316 TTCCCTGCATCAACAAGAAGGCTGAATGGGCCATCCGATGGATCCAAGACAAGGAGTCGA 3375
Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556
|| | |||||||||||||||| || | || ||||| ||||| ||| || | |
Sbjct 3376 CCTTCGGCTCTCGTCTCGTTGCTTTCGCCGCCGTTGAGGGTATTTTCTTCTCCGG-GTCT 3434
Query 133557 TCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615
| ||| || || ||||||||||| |||||||| | | || || || || || |||
Sbjct 3435 TTTGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTGATGCCCGGTCTCACCTTCTCGAAC 3494
Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
|| || || || | ||||||| || |||||||| || |||
Sbjct 3495 GAGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTCGCC 3536
>seq417
Length=19330
Score = 104 bits (114), Expect = 7e-17
Identities = 174/250 (70%), Gaps = 4/250 (2%)
Strand=Plus/Minus
Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655
|||||||||||||| ||| | ||||| ||||| ||||| || ||||| ||||||||
Sbjct 8660 CGCTGAATATAACCCGTTTCGGCCGTTTTGACAGCAGTATCTATAAGACCCTCACGACCA 8601
Query 302656 CCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAA 302713
||||||| |||||||| | || || ||| || |||| | | | ||| | || |
Sbjct 8600 GCCATAGCGTGGAAGAAGAATTCAGTTGGGGT--GAGACCCCGCAGATATGAGTTTTCCA 8543
Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773
| |||||||| | || || || | |||| ||| || || || |||| || | | |
Sbjct 8542 CAAAACCACGAGATTCAGGAGAGTAGTCGTCCTTTGTGAAATGGGGCAATGTACGATATT 8483
Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833
| ||| | || ||||| || || || ||| ||| ||||||| | | ||||||
Sbjct 8482 TGAATCCGAAAGGAATACGTTTACCTTCCACGGACTGTTGTCCCACAACAGCAGTCATCT 8423
Query 302834 GCGAAATATT 302843
| ||||||||
Sbjct 8422 GAGAAATATT 8413
Score = 100 bits (110), Expect = 8e-16
Identities = 107/141 (76%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871
|| |||||| | | ||||||||||||| | || ||||| |||||||| ||||||||
Sbjct 9459 CAAAATTTCCTTGAGACGGGGAACACCAAGCGTGACGTT---CTTGGACGACACACCAGC 9403
Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
||||||||| || || ||||| | || |||| |||||||||||| || || || |
Sbjct 9402 AAAGTGGAAGGTGTTAAGAGTCATCTGTGTAGCCGGCTCACCAATAGACTGGGCAGCCAA 9343
Query 301932 CATACCAACCATTTCTCCTGG 301952
| ||||||||| || || ||
Sbjct 9342 AACACCAACCATCTCACCGGG 9322
>seq78
Length=51106
Score = 98.7 bits (108), Expect = 3e-15
Identities = 335/510 (66%), Gaps = 14/510 (3%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||| | |||||||||||||||||||| || ||||| || |||||||| ||||||
Sbjct 30554 GCTCCGTGGGCGATCATACAATCACGCTCCATCTCTCCGAACCGGAGACCACCGTCGCGA 30613
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
|| | |||||| | ||||| || || || | | || ||| | ||| ||
Sbjct 30614 GCACGACCCTCCACGGGCTGTCGCGTCAGGATCTGAGTCGGTCCGCGCGCACGGGCGTGG 30673
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TGC 251662
||| || | ||||| || |||||||||||| | | || || | ||| | |||
Sbjct 30674 ATCTTGTCGTCGACCATGTGGCGCAGACGCTGGTAGTAGGTCGGTCCCAGGAACACCTGC 30733
Query 251663 TCGAAGGCAT-TTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCA 251721
| | ||| |||| ||| || | |||| |||||||| ||| ||| ||| |
Sbjct 30734 GCCAC--CATCTTGCG-TCCCGTGTGGCCGTTGTACATAACCTCGAATCCGCGAGACTGG 30790
Query 251722 TAACCAAGTTTCTGTAGCTCTGAAGCAATATC--ACCAATCTTGAATTTGCTAAAACTGG 251779
|| || | | | ||| | || | ||| | | | | ||| | | | || |
Sbjct 30791 TAGCCGTGCTCGCGAAGCA--GCCGCGAAATCGAATCGACCGTGACGTCGGTGAAGGGCG 30848
Query 251780 TGCCGTCTCCGTAAAGACCCATTT-GAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGT 251838
|| |||| || | | ||||| | | |||| |||| | | ||| |||
Sbjct 30849 TGGCGTCACCCTCGA-ACCCACGGAGCGACGACACCTTGCTGAGCTGACACTCGATCAAG 30907
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || |||||||| ||||| || ||||| |||||||| | ||||| || ||
Sbjct 30908 TGAGCAATGGTCATACGCGACGGAATGGCGTGGGGGTTGATGATCAGATCGGGGTTGAGA 30967
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957
|| || ||||||||||| |||| || | | || || | || || || ||||| ||
Sbjct 30968 CCCTCCCGCGTGAAGGGCATGTCCTCTTGC-CGGTAGGTGATACCGATGGTACCCTTCTG 31026
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||||| |||||| || |||||
Sbjct 31027 TCCGTGACGAGAAGCGAACTTGTCTCCAAT 31056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471720445320224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |