Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq20 145 9e-29
seq58 118 1e-20
seq262 113 6e-19
>seq20
Length=61044
Score = 145 bits (160), Expect = 9e-29
Identities = 229/323 (71%), Gaps = 9/323 (3%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| ||||||||||| || | |||||||||
Sbjct 3832 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGCGAGATC 3773
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||| ||| ||| || ||||| | |
Sbjct 3772 GACTCCATGAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCGCGTTGCCGAGAGCGACC 3713
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || ||||| || || |||||||||||||||||||| ||| || ||||||||||| |
Sbjct 3712 AGGAGACGGTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGAGTTCATGCCGAGG 3653
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | ||| ||| ||||| |||||||| ||| ||||| ||||||
Sbjct 3652 AGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTTCTCGATTGAGACAGCCTCAACGATG 3593
Query 868931 ATCTGCCTGGGCACGT---CGGCCGAGG-GCTTGTTGACGAGCATCGTGTAGAGCAGGCA 868986
|| | ||| | || | || | || | ||||||| | | | | |||||| |||
Sbjct 3592 ATGT-CCTCGACAACTTTCTTGCTGGGGCGGTTGTTGAGGTG---AGAGAAGAGCAAGCA 3537
Query 868987 GGCAAAGTCGCAGTGCA-ACCCT 869008
||| |||||| ||| | |||||
Sbjct 3536 GGCGAAGTCGGTGTGGAGACCCT 3514
Score = 91.5 bits (100), Expect = 2e-12
Identities = 177/257 (69%), Gaps = 11/257 (4%)
Strand=Plus/Minus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
||||||||||||||||||| ||||||||| ||||| || | |||| | || |
Sbjct 3171 CCGAGTGGATGTTCTCGATCATGATCTGGAACCCGTAGAAACAACGAGCCTCGGGGACCT 3112
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| ||||| |||| || | ||||||||| || ||||| || ||||||||
Sbjct 3111 GAACCTCTCCGCTGAATCGCTCCAGCAGGTTCTCATTGACAATGCCATCTGAGGCGGCGA 3052
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCA-- 869805
| |||||||| ||| | ||| |||| ||||||||||||| | | ||| |||
Sbjct 3051 AGAAAGCCAGAACGCGAGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTTCCAAT 2992
Query 869806 -GTG-GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCC 869863
||| | ||| | || || | ||||| |||||||||| || |||||||||
Sbjct 2991 CGTGCAAATCCTTCGAC----AGATCGATTTCCTCAGCGGTCCAGAAAGAAGCCTCGGCC 2936
Query 869864 TTTTTGTACATCTCCCA 869880
|| |||||||| | |||
Sbjct 2935 TTCTTGTACATTTGCCA 2919
Score = 89.7 bits (98), Expect = 6e-12
Identities = 140/196 (71%), Gaps = 11/196 (6%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | ||||| |||| ||| |||||||| ||||| |||||
Sbjct 3518 ACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGGCCACGCTT 3459
Query 869239 CTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297
||| ||||||||||||| ||| ||| || ||||| || || ||||| |||||||| |
Sbjct 3458 CTTAAGCCAAAAGATGGAAGCA-AAAGACCCGGAGAAGAAAATACCCTCAACGGCGGCGA 3400
Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCG 869354
| | | ||| || | | ||| ||||| ||||||| | |||||| || |
Sbjct 3399 AAGCAACGAGACGAGAGCCGAAG--GTCGA----CTCCTTGTCTTGGATCCATCGGATGG 3346
Query 869355 CCCAGTCGGCCTTTTT 869370
|||| || ||||| ||
Sbjct 3345 CCCATTCAGCCTTCTT 3330
>seq58
Length=97317
Score = 118 bits (130), Expect = 1e-20
Identities = 109/138 (79%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||| ||||||||||| || || ||||| |||||||| || | || || ||||||
Sbjct 71486 GACAGTATCGGCGGCACCGTCACCTGCGTTATCCGCAACGTCCCCGTGGGTCTGGGCGAG 71427
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| ||||||| |||||| ||||||||||| || || ||||||
Sbjct 71426 CCCTGCTTCGACAAGCTCGAGGCGAAGCTCGCGCACGCCATGCTCAGCATTCCCGCCACC 71367
Query 19167 AAGGGATTCGAGATTGGC 19184
||||| |||||||| |||
Sbjct 71366 AAGGGTTTCGAGATCGGC 71349
Score = 89.7 bits (98), Expect = 6e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180
|||||||| ||| | || ||| || ||| ||||| || |||||| ||| |||||
Sbjct 72193 GTCGGCTGTATCGTTGATGGCTGCCCTCCGGGCATGGAGCTCACCGAGGACGATGTCCAG 72134
Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240
|||||| || |||| | || || |||||| |||| || | || || || || |||
Sbjct 72133 CCTCAGATGACTCGGAGACGTCCTGGCCAGAGCGCTCTGACGACTCCCCGGAATGAGAAA 72074
Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300
|| ||||| |||||||| || || ||| |||| |||| || || | || | |||
Sbjct 72073 GACCGCGTGGAAATCCAGTCCGGGACCGAGTTCGGCGTCACCCTAGGTACCCCGATTGGC 72014
Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTAT 18339
| | || |||| |||||||||||| ||||||
Sbjct 72013 ATGATGGTTCGCAACGAGGACCAGCGGCCCAAGGACTAT 71975
>seq262
Length=35446
Score = 113 bits (124), Expect = 6e-19
Identities = 89/107 (83%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||||||||||| || || |||||| |||| | || |||| ||||| | || ||||||
Sbjct 10337 GCCGCCAACTATCTTGATATCAAGGGTCTGTTGGACGTTGGTTGCAAAACCGTTGCCAAC 10396
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct 10397 ATGATCAAGGGCAAGTCTCCCGAAGAGATTCGCAAGACCTTCAACAT 10443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106716402753184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |