Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq430 122 8e-23
seq155 89.7 5e-13
seq768 82.4 7e-11
>seq430
Length=18842
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || || || || || || || ||| ||| |||||| | || |
Sbjct 7152 AAGACCCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCCAGCGACACCATCGACAAT 7093
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||| ||||| || || || ||||| ||||| || |||||||||||
Sbjct 7092 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGTTTGATCTTC 7033
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || |||||||||||| | | | | || || || ||||| |||||||||||
Sbjct 7032 GCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAAAAGGAATCC 6973
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| |||| |||| || ||
Sbjct 6972 ACGCTCCACTTGGTTCTGCGCCTGCGTGGTGG 6941
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || ||||| ||||| || ||||| || || || |
Sbjct 6939 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAAACGATCACGCTGGAGGTGGAGAGTTCA 6880
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||| || || || || |||||||| ||
Sbjct 6879 GACACCATCGATAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCCGACCAG 6820
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||||||||||||||| || ||| |||||||| | | |||| ||||| |||
Sbjct 6819 CAGCGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGTCCGATTACAAC 6760
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| ||||| || || || || |||
Sbjct 6759 ATCCAAAAAGAGTCTACTCTTCAC 6736
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || ||| | || || ||| | |
Sbjct 6711 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATCACGTTGGAGGTGGAAAGCTCG 6652
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| ||||| || || || || |||||||| ||
Sbjct 6651 GACACGATCGACAACGTCAAGAGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAG 6592
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| ||| ||||||||||||| || ||||| |||||
Sbjct 6591 CAGCGTCTGATCTTTGCCGGTAAGCAGCTCGAGGA 6557
>seq155
Length=53423
Score = 89.7 bits (98), Expect = 5e-13
Identities = 551/870 (63%), Gaps = 33/870 (4%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGA-TCACGAATATGTC-GCGGTATTGTTGCA-ATATTT 138414
|||||||||||||||||||| || || || |||| |||| ||||| || ||
Sbjct 15672 ATCTCCCACACGGTCTTGTACAGGCTCTTGA---TGTCTGCGGGGATGTTGGGGATGTTC 15728
Query 138415 TGAAT-GCTCC-CGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCA 138472
|| | | ||| | | ||||||||||||| || |||||| ||| | ||| ||
Sbjct 15729 TGGACCGATCCACCAT--CCGCAATGATGCGGTTCTTCATGTTATCCGACCAAAGACCCA 15786
Query 138473 ACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTC 138532
| || |||||| || | ||| | ||| | |||||| || || || ||||| || |
Sbjct 15787 GGTCGACCAAGTCCTTGAGCAGCCAAGGGTTGACGACCTGGAACTCGCCCGCCAAAACAC 15846
Query 138533 GACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAG 138592
|||| ||| ||||| ||| | ||||| || | |||||| ||||| ||||||
Sbjct 15847 GACGCGAGTAGATGTTCGACGTGTAGGGCTCGAAGCACTCGTTGAAGCCCAGGATCTGAC 15906
Query 138593 CCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGA 138652
|||| | || ||||||||| ||||||| ||| || || | ||| || ||
Sbjct 15907 TCGTGCTGGCCGTCGGCATGGGTGCCACCAGCAGACTGTTACGCACGCCGGTCTGCGCGA 15966
Query 138653 TTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGT 138712
| ||||||| | ||||||||| | |||| | || | | |||||| || |
Sbjct 15967 TCTTGGCCTTGAGAGTATCCCAGTCCCAGAGATCGGTGGGGGTACGATCCCACATGTCAT 16026
Query 138713 ACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTT 138772
|||| | || ||| ||||| ||| ||||||| ||||| ||| || |
Sbjct 16027 ACTGGAGAATACCCTGGGACACGGGAGAGCCCTCGTACGTTTCGTAGGTACCGTGTTCCT 16086
Query 138773 GCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGAT 138832
|| | ||| | || || || || | ||| ||||| ||| ||||| |
Sbjct 16087 TGGCAAGCTCCGAGGAAGCAGTCAGAGCTCCGTGGTAGATAGTCTCGAAGATCTGGATGT 16146
Query 138833 TGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGA--GCATCGTGAACGCGTCGGC 138890
| ||| ||||||| || | |||| ||| | ||| ||| || |||||
Sbjct 16147 TCAGCTGCTTTGCCTCGGGCGAGTCAAAGGGCAGGCGCAAGGCA--AGGAAAGCATCGGC 16204
Query 138891 CAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTC 138950
||| || | || || | | | ||| || || || || | || ||| | ||| ||
Sbjct 16205 CAGACCGTTGACTCCGAGAGCAATAGGCCGGTGACG--GAAGTTACTCTTCT-TGGCCTC 16261
Query 138951 G---ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT 139007
| | |||||| ||||| | |||||||| ||||| | || || || | |||| |
Sbjct 16262 GGGAACAGGATAGTAGTTGATGTCGATGATCTTGTTCAGGTTGCGAACCAAAACCTGA-A 16320
Query 139008 CGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACG-ACGTCGACA 139065
|| | | | || | | |||| |||||| ||| | | |||| ||| |||| |
Sbjct 16321 CGACTTCGTGAAGCTTGCCAAAGTCGTATTCGCCACGGGCAGCGTCAACGAACGTAG--- 16377
Query 139066 AATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTAT 139125
|| || || || | |||||| || || || |||||||| |||||||
Sbjct 16378 -------GGAGGGCAAGAGAAGCCAAGTTGCAGACAGCGACCTCGTCGGGAGCGCTGTAC 16430
Query 139126 TCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTT 139185
|| |||||||| | || | || | ||| || || || || | || |||||
Sbjct 16431 TCAACAATTTCAGTGCATAGGTTGGAGCTGCGGATAGTGCCCAAGTTCTTCTGGTTGCTC 16490
Query 139186 TTTCGGTTACAAGCATCTTTGTAAAGCATA 139215
|| ||| |||||||||||||| ||||||
Sbjct 16491 TTCTTGTTGCAAGCATCTTTGTACAGCATA 16520
>seq768
Length=20780
Score = 82.4 bits (90), Expect = 7e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 24796 AGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGA 24855
|||||| || ||||| || ||||| || || ||| ||||||| || || || ||||||||
Sbjct 8518 AGACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGA 8459
Query 24856 GGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915
||| | | | || || || ||||| || ||||| ||||| || ||| ||||| |
Sbjct 8458 GGACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTGGTGCT 8399
Query 24916 GCGATTGCGCGGAGGCGG 24933
||| |||| || || ||
Sbjct 8398 GCGCCTGCGTGGTGGTGG 8381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449868626594560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |