Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq20 127 3e-23 seq155 96.9 5e-14 seq492 95.1 2e-13 seq262 95.1 2e-13 >seq20 Length=61044 Score = 127 bits (140), Expect = 3e-23 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || || ||| |||||| ||||||||||| || | ||||||||| ||||||| Sbjct 3823 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGCGAGATCGACTCCATG 3764 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| | | ||| |||| || ||||| | | || || ||| Sbjct 3763 AAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCGCGTTGCCGAGAGCGACCAGGAGACGG 3704 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || || ||||| || |||||||||||||| ||| || ||||||||||| ||| || | Sbjct 3703 TCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGAGTTCATGCCGAGGAGGGCACAG 3644 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 || || | ||| | | ||||| |||||||| ||| ||||| | |||||| Sbjct 3643 GGGAGGGCATCGGTCAAGAACTCCTTCTCGATTGAGACAGCCTCAACGATGAT 3591 Score = 86.0 bits (94), Expect = 1e-10 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | ||||| ||| ||| |||||||| ||||| ||||| Sbjct 3518 ACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGGCCACGCTT 3459 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||||||||||| | ||| || ||||| || || ||||| |||||||| || Sbjct 3458 CTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAAGAAAATACCCTCAACGGCGGCGAA 3399 Query 794460 GCCGACGAGCCG 794471 | ||||| || Sbjct 3398 AGCAACGAGACG 3387 >seq155 Length=53423 Score = 96.9 bits (106), Expect = 5e-14 Identities = 176/258 (68%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| ||||| || || |||| ||| || || |||||||| || || | |||||||| Sbjct 16927 CTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTTGGA 16986 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || | | ||||| || | || || | ||| || | || Sbjct 16987 AGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGATTCGGTGAACGTTGAGACC 17046 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || || | ||||||||| | ||| || | ||||| || || || || || || Sbjct 17047 GATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATACCATC 17106 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| ||||||| || | ||| |||||||| | || || | | || || Sbjct 17107 AATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGGCAAGCTGAGGCTGGGGAGTTCC 17166 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||| || ||||| Sbjct 17167 GGCATTGAACAGGGTGGG 17184 >seq492 Length=31988 Score = 95.1 bits (104), Expect = 2e-13 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 2175077 GCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTG 2175136 |||||| |||||||| ||||| || || || |||| ||| |||| |||| ||||||||| Sbjct 11906 GCCGTCCGTGCCGTTCTTAAAACCAACGGGGAACGACAGACCCGAGGCCAGTTCGCGGTG 11847 Query 2175137 CACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCC 2175173 ||||| |||||||||||||||||| || || ||| Sbjct 11846 AACCTGCGACTCGGTGGTGCGCGCGCCAACCGCACCC 11810 >seq262 Length=35446 Score = 95.1 bits (104), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||||||||| || || |||||| || | || | || ||||| ||||| |||||| Sbjct 10337 GCCGCCAACTATCTTGATATCAAGGGTCTGTTGGACGTTGGTTGCAAAACCGTTGCCAAC 10396 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | |||||||||||||| ||||| || || ||||||||||| ||||| Sbjct 10397 ATGATCAAGGGCAAGTCTCCCGAAGAGATTCGCAAGACCTTCAACAT 10443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915698358261728