Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq430 116 2e-21
seq768 100 2e-16
seq245 93.3 3e-14
>seq430
Length=18842
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | || ||||||||||| ||||| |||||||| || | || | ||
Sbjct 6500 AGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCGTCC 6559
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| |||||||| || |||||||| | || | |||||||| ||
Sbjct 6560 TCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCT 6619
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | || || || | || || |||
Sbjct 6620 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAACGTGATCGTC 6679
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||||||||| || |||||||||||
Sbjct 6680 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 7250 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCC 7309
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || ||||| || | || | |||||||||||
Sbjct 7310 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 7369
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | | |||||| || | ||| ||||||
Sbjct 7370 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTC 7429
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 7430 TTGCCGGTGA 7439
Score = 102 bits (112), Expect = 5e-17
Identities = 147/205 (72%), Gaps = 8/205 (4%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | ||| ||||| || ||||| ||||| || ||| |||| ||||
Sbjct 6955 CAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 7014
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || |||||||||| || ||||| || | || | |||||||||||
Sbjct 7015 CTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGGATACCCTCCTTGTC 7074
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || || || || | ||||| || ||| || || |||| ||| |
Sbjct 7075 CTGGATCTTCGACTTCAC--AT--TGTCGATGGTGTCGCTGGATTCAACCTCAAGGGTGA 7130
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTAC 34965
|||||||||| ||||||||||| ||
Sbjct 7131 TGGTCTTTCCAGTGAGGGTCTTGAC 7155
>seq768
Length=20780
Score = 100 bits (110), Expect = 2e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||||| ||| ||||||||| ||||| |||||||| || | || | ||
Sbjct 8398 CAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTC 8457
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 8458 CTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTC 8517
>seq245
Length=44002
Score = 93.3 bits (102), Expect = 3e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| ||| |||| |||| || || ||||| || |||||||
Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| || || |||||||| | || | ||||||||||| | || || ||||||
Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3902
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || | | ||| || || | ||| |||||||| ||||| |||||||| || |
Sbjct 3901 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3842
Query 34968 A 34968
|
Sbjct 3841 A 3841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325672349749088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |