Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq430 113 9e-20
>seq430
Length=18842
Score = 113 bits (124), Expect = 9e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | |||||| ||| || ||||| || || || || || || | | |||
Sbjct 6497 CGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGTCCG 6556
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || |||||||| || | || || || ||||| || || ||||||
Sbjct 6557 TCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTA 6616
Query 82716 TCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||| ||||| || || || || ||||| || ||| || ||||| || ||
Sbjct 6617 TCTTGAATC-TTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAACGTGAT 6675
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||| || | ||||| || || ||||||||
Sbjct 6676 CGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 93.3 bits (102), Expect = 8e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | ||| |||||||| ||||| || || || ||||| |
Sbjct 6711 TACCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGG 6770
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || || || | || || || |||||||| | | || || || ||||
Sbjct 6771 ACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAG 6830
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || || ||||||||||| ||| ||||| || || || || || || || | ||
Sbjct 6831 GGATGCCCTCCTTATCTTGGATC-TTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCC 6889
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||| || ||||| || || || | ||||| || || || |||||
Sbjct 6890 ACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981762389586528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |