Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq155 116 9e-21 >seq155 Length=53423 Score = 116 bits (128), Expect = 9e-21 Identities = 224/327 (69%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726 || ||| |||| | || | ||||| ||| | | || |||||| ||||||| ||| Sbjct 16995 AACGGTTCTTCCAACGGTATCGTTCCTATGCTCCGTGTGTTCAACAACACTGCTCGGTAT 16936 Query 110727 GTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783 || | || ||||| || | | || | || ||||||||||| || || ||||| Sbjct 16935 GTTGACCAGGGTGGCAACAAGCGTCCGGGTGCTTTCGCTATCTATCTGGAGCCCTGGCAC 16876 Query 110784 TCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCA 110843 || ||| | || |||||||| || || |||||||| || || |||||| ||||| Sbjct 16875 TCGGATGTCTTCGAATTCTTGGATCTCCGTAAAAACCACGGCAAGGAAGAAGTGAGAGCC 16816 Query 110844 CGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAAT 110903 |||||| | || ||||| | |||| | | || | |||||||| || ||| | | || Sbjct 16815 CGTGATCTTTTCTATGCTCTCTGGACTCCGGACCTGTTCATGAAGCGGGTTGAGGCCAAC 16756 Query 110904 GGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAA 110962 || ||| | || | || || || || |||| || || | ||||| || ||| | Sbjct 16755 GGTGACTGGACCCTCTTCTG-CCCCAACGAGGCTCCAGGACTGGCCGATGTGTACGGAGA 16697 Query 110963 AGAGTTTGAAGACCTTTACGAAAAATA 110989 |||||||| | |||||||||||| || Sbjct 16696 CGAGTTTGATGCCCTTTACGAAAAGTA 16670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186734458487072