Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq20 165 1e-34
>seq20
Length=61044
Score = 165 bits (182), Expect = 1e-34
Identities = 221/300 (74%), Gaps = 7/300 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||| || || |||||||| ||||| |||| |
Sbjct 2915 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCTGAGGAAATCGATC 2973
Query 1455835 TCGGCGCCG-ACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATC 1455890
| | || | | | | | ||| ||| ||| ||||||||||||| | ||||||
Sbjct 2974 T-GTCGAAGGATTTGCACGATTGGAACAACCGCCTGAACGACGACGAGCGCTACTTCATC 3032
Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950
| ||| || || ||| ||||||||| |||||||| || ||||||||| |
Sbjct 3033 TCTCGCGTTCTGGC-TTTCTTCGCCGCCTCAGATGGCATTGTCAATGAGAACCTGCTGGA 3091
Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010
|| || | |||||| || | || ||||| |||| || |||||||||||||||
Sbjct 3092 GCGATTCAGCGGAGAGGTTCAGGTCCCCGAGGCTCGTTGTTTCTACGGGTTCCAGATCAT 3151
Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
||||| ||||||||||| ||||||||||| || |||||||| |||||| ||||||| ||
Sbjct 3152 GATCGAGAACATCCACTCGGAAACCTACTCCCTTCTGATCGATACCTACATCAAGGAGCC 3211
Score = 120 bits (132), Expect = 4e-21
Identities = 185/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||||| ||||| ||| |||||||| ||||| | | ||| | || || ||
Sbjct 3591 ATCATCGTTGAGGCTGTCTCAATCGAGAAGGAGTTCTTGACCGATGCCCTCCCCTGTGCC 3650
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
||| ||||||||||| ||| | || |||||||||||||| || || || || ||||| |
Sbjct 3651 CTCCTCGGCATGAACTCCAAC-CTGATGTGCCAGTACATCGAGTTC-GTGGCTGACCGTC 3708
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || | || |||||| || |||| ||| | | ||||||| ||| | |||
Sbjct 3709 TCCTGGTCGCTCTCGGCAACGC-GAAGTACTTCAATGCCACCAACCCCTTCGACTTCATG 3767
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|||| ||||||||| | || ||||||||||| |||||| || || || || |||
Sbjct 3768 GAGTCGATCTCGCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 3827
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
|||||||| || | ||||
Sbjct 3828 AAGGCCGGTGTTATGGCCA 3846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177314280130624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |