Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq20 165 1e-34 >seq20 Length=61044 Score = 165 bits (182), Expect = 1e-34 Identities = 221/300 (74%), Gaps = 7/300 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || |||||||| ||||| |||| | Sbjct 2915 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCTGAGGAAATCGATC 2973 Query 1455835 TCGGCGCCG-ACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATC 1455890 | | || | | | | | ||| ||| ||| ||||||||||||| | |||||| Sbjct 2974 T-GTCGAAGGATTTGCACGATTGGAACAACCGCCTGAACGACGACGAGCGCTACTTCATC 3032 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 | ||| || || ||| ||||||||| |||||||| || ||||||||| | Sbjct 3033 TCTCGCGTTCTGGC-TTTCTTCGCCGCCTCAGATGGCATTGTCAATGAGAACCTGCTGGA 3091 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 || || | |||||| || | || ||||| |||| || ||||||||||||||| Sbjct 3092 GCGATTCAGCGGAGAGGTTCAGGTCCCCGAGGCTCGTTGTTTCTACGGGTTCCAGATCAT 3151 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 ||||| ||||||||||| ||||||||||| || |||||||| |||||| ||||||| || Sbjct 3152 GATCGAGAACATCCACTCGGAAACCTACTCCCTTCTGATCGATACCTACATCAAGGAGCC 3211 Score = 120 bits (132), Expect = 4e-21 Identities = 185/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||||| ||||| ||| |||||||| ||||| | | ||| | || || || Sbjct 3591 ATCATCGTTGAGGCTGTCTCAATCGAGAAGGAGTTCTTGACCGATGCCCTCCCCTGTGCC 3650 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| ||||||||||| ||| | || |||||||||||||| || || || || ||||| | Sbjct 3651 CTCCTCGGCATGAACTCCAAC-CTGATGTGCCAGTACATCGAGTTC-GTGGCTGACCGTC 3708 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || |||||| || |||| ||| | | ||||||| ||| | ||| Sbjct 3709 TCCTGGTCGCTCTCGGCAACGC-GAAGTACTTCAATGCCACCAACCCCTTCGACTTCATG 3767 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||||||| | || ||||||||||| |||||| || || || || ||| Sbjct 3768 GAGTCGATCTCGCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 3827 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 |||||||| || | |||| Sbjct 3828 AAGGCCGGTGTTATGGCCA 3846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177314280130624