Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq430 123 2e-23
seq245 100 3e-16
>seq430
Length=18842
Score = 123 bits (136), Expect = 2e-23
Identities = 170/234 (73%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
||||||||||| | | | |||| || | |||||||||||| || |||||||| ||
Sbjct 6482 TTTCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCC 6541
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| | || || |||| || ||||||||||| ||||| |||| ||||||||||| | |
Sbjct 6542 GAGAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGA 6601
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGA 35682
|| | || |||||| || ||||| ||| | |||| | | |||||| |||
Sbjct 6602 GGGATGCCCTCCTTATCTTGAATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCT--- 6657
Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||||||| ||||||||| || || || | || || || || ||||||||
Sbjct 6658 TTCCACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 118 bits (130), Expect = 1e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| ||||| ||||||||||||| || || || | || |||| ||||||||| |||||
Sbjct 6748 CTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAA 6807
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | ||| | || |||||| || |||||| ||||| |
Sbjct 6808 GATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTT 6867
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| ||| |||||||||| |||||||||||| || || | ||| ||
Sbjct 6868 ATCGATGGTGTCTGAACTC---TCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTT 6924
Query 35722 CACAAATATCTGCAT 35736
|| || || |||||
Sbjct 6925 GACGAAGATTTGCAT 6939
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||||| || | ||| |||||||| |||||||| ||||
Sbjct 6941 CCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAG 7000
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || |||||||||||||| || || ||||| |||||||| || | |||
Sbjct 7001 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGG 7060
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||||| |||||| ||||| | | | | |||||||| ||||| |||
Sbjct 7061 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACC 7120
Query 35690 TCCACCGTGATCGTTTTACCCGT 35712
|| | ||||| || || || ||
Sbjct 7121 TCAAGGGTGATGGTCTTTCCAGT 7143
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || || || | || || |||||||| || || ||
Sbjct 7270 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 7329
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | || | || |||||||||| |||||| ||| | ||
Sbjct 7330 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGAC-GT 7388
Query 35665 TGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | ||||||||||| || ||||| | ||||| || || || ||
Sbjct 7389 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 7437
>seq245
Length=44002
Score = 100 bits (110), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||| || | || || ||||||||||| || || |
Sbjct 4021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3962
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
| | ||||||||||| | |||| || |||||||||| |||||| ||| | ||||
Sbjct 3961 TAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGAC-GTTG 3903
Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||||||||| || || || | || || || |||||||||| || || ||
Sbjct 3902 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3843
Query 35726 AA 35727
||
Sbjct 3842 AA 3841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450764568892160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |