Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq430 113 5e-20
seq245 104 2e-17
seq155 102 8e-17
>seq430
Length=18842
Score = 113 bits (124), Expect = 5e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| || ||||| ||||| || |||||||||||| | ||| || || ||
Sbjct 7253 ACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCCTCA 7312
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || |||| |||||||||||| || || ||||| || || || ||
Sbjct 7313 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGG 7372
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||| ||| || || ||||| || ||||| ||
Sbjct 7373 ATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTG 7432
Query 134685 CCGGT 134689
|||||
Sbjct 7433 CCGGT 7437
Score = 109 bits (120), Expect = 6e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
||||| || | |||||| | || ||||| ||||| ||||| || |||||||||||
Sbjct 6482 TTTCCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCC 6541
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| || | ||| |||||||| || || ||||| |||| ||||||||| |||||
Sbjct 6542 GAGAGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGA 6601
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| ||||| || || |||||||| || ||||| ||| | ||||| || ||||
Sbjct 6602 GGGATGCCCTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCC 6661
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || || || || || | || || ||||| || |||||
Sbjct 6662 ACCTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 109 bits (120), Expect = 6e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || | ||| ||||||||||||||||| |||||||||||| | |||| ||
Sbjct 6950 AGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGA 7009
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || || ||||||||||||||||| || || || || ||
Sbjct 7010 CCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGGATACCCTCC 7069
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || ||| | |||||| ||||| || || || ||
Sbjct 7070 TTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACCTCAAGGGTG 7129
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGA 134703
||||| || || || | || || ||||
Sbjct 7130 ATGGTCTTTCCAGTGAGGGTCTTGACGA 7157
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || || || || ||||| |||||||| |||
Sbjct 6713 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 6772
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || | ||| || || ||||| |||||||||||||| ||||| ||
Sbjct 6773 AGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGG 6832
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || || || || | ||||| || |||||
Sbjct 6833 ATGCCCTCCTTATCTTGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACC 6892
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || ||||| ||||| | ||| || ||||| ||||||||
Sbjct 6893 TCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
>seq245
Length=44002
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580
|| |||| || ||||||||||||| | |||| | || || ||||| || || || |
Sbjct 4024 ATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGA 3965
Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640
| || | ||||||||| ||||| || ||||| || || || || || || |||||
Sbjct 3964 AGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGT 3905
Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700
||| | |||||| ||| || |||||||| |||||||| ||||| || | || || |
Sbjct 3904 TGTCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGA 3845
Query 134701 CGAAA 134705
|||||
Sbjct 3844 CGAAA 3840
>seq155
Length=53423
Score = 102 bits (112), Expect = 8e-17
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292
|| ||| |||| ||| | || ||||| | || | |||||||||||||| ||||||
Sbjct 16558 GCTATTCTCGAGGCTCAGACTGAGACCGGAAACCCCTTTATGCTGTACAAAGATGCTTGC 16499
Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352
||| || ||||| || | ||| ||||||| || | || ||| || ||| |||||
Sbjct 16498 AACAAGAAGAGCAACCAGAAGAACTTGGGCACTATCCGCAGCTCCAACCTATGCACTGAA 16439
Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAA 8393
||||| |||||||||| |||||||| || || || |||||
Sbjct 16438 ATTGTTGAGTACAGCGCTCCCGACGAGGTCGCTGTCTGCAA 16398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505365852343040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |