Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq430 96.9 3e-15
seq155 95.1 1e-14
>seq430
Length=18842
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| |||||||| || ||||| ||| || |||| | || || | ||| ||||||
Sbjct 6743 GTAGACTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCG 6802
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || | |||||| || || || || | ||||| ||||| ||||||| | |||
Sbjct 6803 GCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTC 6862
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||||| || || || || || || | ||| || || |||||
Sbjct 6863 ACGTTATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTC 6922
Query 27231 TTCACAAAGATTTGCATA 27248
|| || ||||||||||||
Sbjct 6923 TTGACGAAGATTTGCATA 6940
>seq155
Length=53423
Score = 95.1 bits (104), Expect = 1e-14
Identities = 272/418 (65%), Gaps = 3/418 (1%)
Strand=Plus/Plus
Query 131609 TCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCC 131668
||| |||| || | || | ||| | ||||| ||||| |||||||| |||| |||
Sbjct 16727 TCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCC 16786
Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728
|| ||| | || || || ||||| | ||| | ||||| | || ||||
Sbjct 16787 GGAGTCCAGAGAGCATAGAAAAGATCACGGGCTCTCACTTCTTCCTTGCCGTGGTTTTTA 16846
Query 131729 ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788
| || || || || || | |||| |||||||| |||| ||| | || | ||
Sbjct 16847 CGGAGATCCAAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCA 16906
Query 131789 CCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845
|| ||||| || || || | ||||| ||| | |||||||| | || || | |
Sbjct 16907 CCCGGACGCTTGTTGCCACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGC 16966
Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905
|| || | | |||||||| || ||||| | ||||||| ||| | || | |
Sbjct 16967 ATAGGAACGATACCGTTGGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGG 17026
Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTT 131965
||| |||||||||||| || ||||| || || || ||||| | || ||| | |
Sbjct 17027 ATTCGGTGAACGTTGAGACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTC 17086
Query 131966 AGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGG 132023
||||||| ||| ||||| || | ||||||| | || ||||| | ||||| ||||
Sbjct 17087 AGAGTGTCATAAATACCATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGG 17144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424907718369024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |