Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq430 96.9 3e-15 seq155 95.1 1e-14 >seq430 Length=18842 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| |||||||| || ||||| ||| || |||| | || || | ||| |||||| Sbjct 6743 GTAGACTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCCTCCAACTGCTTACCG 6802 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || | |||||| || || || || | ||||| ||||| ||||||| | ||| Sbjct 6803 GCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCTTGGATCTTGCTCTTC 6862 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| || || || || || || | ||| || || ||||| Sbjct 6863 ACGTTATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTTTTTCCGGTGAGAGTC 6922 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 6923 TTGACGAAGATTTGCATA 6940 >seq155 Length=53423 Score = 95.1 bits (104), Expect = 1e-14 Identities = 272/418 (65%), Gaps = 3/418 (1%) Strand=Plus/Plus Query 131609 TCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCC 131668 ||| |||| || | || | ||| | ||||| ||||| |||||||| |||| ||| Sbjct 16727 TCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCC 16786 Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728 || ||| | || || || ||||| | ||| | ||||| | || |||| Sbjct 16787 GGAGTCCAGAGAGCATAGAAAAGATCACGGGCTCTCACTTCTTCCTTGCCGTGGTTTTTA 16846 Query 131729 ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788 | || || || || || | |||| |||||||| |||| ||| | || | || Sbjct 16847 CGGAGATCCAAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCA 16906 Query 131789 CCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845 || ||||| || || || | ||||| ||| | |||||||| | || || | | Sbjct 16907 CCCGGACGCTTGTTGCCACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGC 16966 Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905 || || | | |||||||| || ||||| | ||||||| ||| | || | | Sbjct 16967 ATAGGAACGATACCGTTGGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGG 17026 Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTT 131965 ||| |||||||||||| || ||||| || || || ||||| | || ||| | | Sbjct 17027 ATTCGGTGAACGTTGAGACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTC 17086 Query 131966 AGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGG 132023 ||||||| ||| ||||| || | ||||||| | || ||||| | ||||| |||| Sbjct 17087 AGAGTGTCATAAATACCATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGG 17144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424907718369024