Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq155 170 2e-37 seq20 111 2e-19 >seq155 Length=53423 Score = 170 bits (188), Expect = 2e-37 Identities = 515/781 (66%), Gaps = 27/781 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | ||||| || || ||||| || || |||| ||| || ||| Sbjct 15854 GTAGATGTTCGACGTGTAGGGCTCGAAGCACTCGTTGAAGCCCAGGATCTGACTCGTGCT 15913 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||| || ||||| ||||||| || ||||||||||| | || ||| | ||| | Sbjct 15914 GGCCGTCGGCATGGGTGCCACCAGCAGACTGTTACGCACGCCGGTCTGCGCGATCTTGGC 15973 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAAACTGAA 110885 ||||||| ||||||||| || || | ||| || |||||||||||| |||| | Sbjct 15974 CTTGAGAGTATCCCAGTCCCAGA-GATCGGTGGGGGTACGATCCCACATGTCATACTGGA 16032 Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945 | | || |||||| ||||||| ||||| | ||||| |||| ||| || | | || | Sbjct 16033 GAATACCCTGGGACACGGGAGAGCCCTCGTACGTTTCGTAGGTACCGTGTTCCTTGGCAA 16092 Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 111005 || || || ||| | | |||| || || || || ||||| | |||| || Sbjct 16093 GCTCCGAGGAAGCAGTCAGAGCTCCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCT 16152 Query 111006 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA---AATAAATACATCCGCGAGAC 111062 ||| || || || ||||| | | || || ||| || || |||| || |||| Sbjct 16153 GCTTTGCCTCGGGCGAGTCAAAGG-GCAG--GCGCAAGGCAAGGAAAGCATCGGCCAGAC 16209 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AA 111119 | | || || | | ||||||| | ||| || | ||| ||| || ||| || Sbjct 16210 CGTTGACTCCGAGAGCAATAGGCCGGTGACGGAAGTTACTCTTCTTGGC---CTCGGGAA 16266 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC---AATCTTTGTGA 111176 | ||||| | || |||| |||| ||| || || | ||| || || || Sbjct 16267 CAGGATAGTAGTTGATGTCGATGATCTTGTTCAGGTT---GCGAACCAAAACCTGAACGA 16323 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 ||| ||||| || || | || | || | | | | || || | || |||| Sbjct 16324 CTTCGTGAAGCTTGCCAAAGTCGTATTCGCCACGGGCAGCGTCAACGAACGTAGGGAGGG 16383 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 | | || ||||| ||||| ||||| ||| || | | ||||||| | |||||| | Sbjct 16384 CAAGAGAAGCCAAGTTGCAGACAGCGACCTCGTCGGGAGCGCTGTACTCAACAATTTCAG 16443 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | |||| |||||| || || || ||||| ||||| ||||| |||||||||||||| | Sbjct 16444 TGCATAGGTTGGAGCTGCGGATAGTGCCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAG 16503 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||| ||||| ||||| |||| | || ||||| ||||| | | ||||||||| | || Sbjct 16504 CATCTTTGTACAGCATAAAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGAATAGCATACC 16563 Query 111417 AAA-CATCGGCGGCTGGTACAATG-GCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGT 111473 ||| | || | | || | | || ||| |||| || |||||| ||||||| ||||| Sbjct 16564 AAAGCTTCTGAGCCTTG---ATTGTGCGGCGGCCTCGGCCCTCCTTCTCGTAC-CTGTGT 16619 Query 111474 A 111474 | Sbjct 16620 A 16620 Score = 127 bits (140), Expect = 3e-24 Identities = 397/612 (65%), Gaps = 11/612 (2%) Strand=Plus/Plus Query 111464 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 111523 |||||| ||| ||||| |||||||| || || | | |||| || ||||| |||| | Sbjct 16670 TACTTTTCGTAAAGGGCATCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCG 16729 Query 111524 TCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGA 111583 | || ||||| || | ||| | ||| ||||||||||||||||||| ||||| ||| Sbjct 16730 TTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGA 16789 Query 111584 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 |||| || | | || ||||| | | | ||||| | || ||||| || Sbjct 16790 GTCCAGAGAGCATAGAAAAGATCACGGGCTCTCACTTCTTCCTTGCCGTGGTTTTTACGG 16849 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | || | ||| || | || ||||| |||||| ||||| ||||||| |||| || ||| Sbjct 16850 AGATCCAAGAATTCGAAGACATCCGAGTGCCAGGGCTCCAGATAGATAGCGAAAGCACCC 16909 Query 111704 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 ||||| ||| | || | ||||| || || ||| ||| || || || ||| Sbjct 16910 ---GGACGCTTGTTGCCACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGC 16966 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 || |||| ||||| | || ||| || || || | ||| || | | || | Sbjct 16967 ATAGGAACGATACCGTTGGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGG 17026 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | || | || | || ||||| || || ||| ||||| |||||| | | Sbjct 17027 ATTCGGTGAACGTTGAGACCGATACCACCCGCGGTCTTGGAGATCATCGCACATGTCTTC 17086 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 ||||| |||| ||||| | || ||||||||| | ||| |||||||| || Sbjct 17087 AGAGTGTCATAAATACCATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCACGAGGCA 17146 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACC 111996 | ||| || || || || |||||||| ||||| || | || || |||| || | Sbjct 17147 AGCTGAGGCTGGGGAGTTCCGGCATTGAACAGGGTGGGGGAAGCATGCGTGAAGTATTTC 17206 Query 111997 TTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 112056 ||||||||| || || ||||| | | | || || || || || ||||| || | Sbjct 17207 -TGGGACATCAAGTGATAGGTCTCGATGGCCCGCTCGATATCCTCTCCATGGATACCAAC 17265 Query 112057 TGCGACCCGCAT 112068 || || ||||| Sbjct 17266 GGCCACACGCAT 17277 >seq20 Length=61044 Score = 111 bits (122), Expect = 2e-19 Identities = 344/523 (66%), Gaps = 22/523 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| | || || ||||| Sbjct 3823 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGCGAGATCGACTCCATG 3764 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AAT--GGGTGGC--ACCCCAACTTGTTTGAGG 122484 ||||| || || || | || || | | | | || || | | || ||| Sbjct 3763 AAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCGCGTTGCCGAGAGCGACC------AGG 3710 Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544 ||||| || | ||| |||| ||||||| | ||||| | |||||||| |||| |||| Sbjct 3709 AGACGGTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGAGTTCATGCCGAGGAGG 3650 Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604 ||| ||||| || || | |||| | ||||| || || ||||| | |||| Sbjct 3649 GCACAGGGGAGGGCATCGGTCAAGAACTCCTTCTCGATTGAGACAGCCTCAACGATGATG 3590 Query 122605 GCGTGGATAGTTTCGGTAGTGGGTC---TATTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661 | | || | || | |||| | | || | || ||||||| ||| Sbjct 3589 TCCTCGACAACTTTCTTGCTGGGGCGGTTGTTGAGGTGAGA---GAAGAGCAAGCAGGCG 3533 Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721 || || |||||||||||| || || || || || || || |||||| ||||| ||| Sbjct 3532 AAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGC 3473 Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 122780 || || || |||||||| | |||| | || | ||| || |||||||||||||| ||||| Sbjct 3472 ATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAA-GACCCGGAGAAGAAAATACC 3414 Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACC 122839 ||| || || || |||| || || | |||||| ||| | ||| | | | || Sbjct 3413 CTCAACGGCGGCGAAAGCAACGAGACGAGAGCCGAAGG-TCGACTCCTTGTCTTGGATCC 3355 Query 122840 ATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGT 122882 || || ||||||| |||||||| | || || || || || Sbjct 3354 ATCGGATGGCCCATTCAGCCTTCTTGTTGATGCAGGGAACTGT 3312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627991554739200