Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq20 116 4e-21
seq635 102 1e-16
seq155 100 3e-16
>seq20
Length=61044
Score = 116 bits (128), Expect = 4e-21
Identities = 98/118 (83%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGG 94886
||||||||||| |||||||| || | ||| ||| | || | |||||| |||||||| ||
Sbjct 3408 GTTGAGGGTATTTTCTTCTCCGGGT-CTTTTGCTTCCATCTTTTGGCTTAAGAAGCGTGG 3466
Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|| ||||| |||||| |||||| |||||||| ||||||||||||||||| ||||||
Sbjct 3467 CCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCAC 3524
>seq635
Length=16049
Score = 102 bits (112), Expect = 1e-16
Identities = 200/293 (68%), Gaps = 2/293 (1%)
Strand=Plus/Plus
Query 168464 CCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAA 168523
|||||| ||||| | ||| || | ||||| ||||| ||| |||| ||||||||
Sbjct 5648 CCACCCTGAAGACGGGAACCGAAGTTACCACTGGGCTCCAGACAGTTGACGTTGTTTGAG 5707
Query 168524 CCCATGTAGTCATTCGCCAACTTGACAATCGTGTCC-GCGAGAGAGACTTCACCGTGGTG 168582
|| | | ||| | |||||| ||||||||| | || || || |||||||||| ||
Sbjct 5708 CCGACGAAGTTTTGCGCCAAACCGACAATCGTCTGTTGCAAGGAAG-CTTCACCGTGCTG 5766
Query 168583 GTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAG 168642
|||||| || | | | ||| | ||||| | | || ||||| || | ||| ||
Sbjct 5767 GTACGCCGTCATACCGGAGACGTGACCGGCCAATTCGACTACCTTCATATCCTTCTTCAG 5826
Query 168643 ATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCAT 168702
||| |||| || ||||||| ||||| || || |||||||||||||| | |
Sbjct 5827 ATTGCGCCGGAAACAGGCGTACAGGACCTTACGCTGACCCGGCTTGAGACCATCGACAAC 5886
Query 168703 GTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGT 168755
| | |||||| || | |||||||| ||||||| | ||| |||||||
Sbjct 5887 GGAAGGGATAGATCGGATGTTGTCCGCCATACTGAAGAGAATGAGTTCCTTGT 5939
>seq155
Length=53423
Score = 100 bits (110), Expect = 3e-16
Identities = 254/384 (66%), Gaps = 2/384 (1%)
Strand=Plus/Minus
Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCA 105273
||||| || |||| |||||| || | ||||| || |||| ||| || | ||| ||||
Sbjct 16237 CACCGGCCTATTGCTCTCGGAGTCAACGGTCTGGCCGATGCTTTCCTTGCCTTG-CGCCT 16179
Query 105274 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCA 105333
| ||||| || ||| || ||| | | || | || || ||||| || || ||
Sbjct 16178 GCCCTTTGACTCGCCCGAGGCAAAGCAGCTGAACATCCAGATCTTCGAGACTATCTACCA 16119
Query 105334 CGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393
|| ||||| || || ||| | || ||| | ||| | || ||||| | ||
Sbjct 16118 CGGAGCTCTGACTGCTTCCTCGGAGCTTGCCAAGGAACACGGTACCTACGAAACGTACGA 16059
Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453
||| ||||| | || || || | || || | ||| |||||||| || |||
Sbjct 16058 GGGCTCTCCCGTGTCCCAGGGTATTCTCCAGTATGACATGTGGGATCGTACCCCCACCGA 15999
Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513
|| || |||||||| ||||||||| ||| | ||| || | |||||||||||
Sbjct 15998 TCTCTGGGACTGGGATACTCTCAAGGCCAAGATCGCGCAGACCGGCGTGCGTAACAGTCT 15939
Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573
|| |||| || ||||| || ||| ||| || ||| |||| || || |||||
Sbjct 15938 GCTGGTGGCACCCATGCCGACGGCCAGCACGAGTCAGATCCTGGGCTTCAACGAGTGCTT 15879
Query 105574 TGAACCCTACACGACGAACATCTA 105597
|| ||||||||| ||||||||||
Sbjct 15878 CGAGCCCTACACGTCGAACATCTA 15855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583223238004480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |