Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq20 116 4e-21 seq635 102 1e-16 seq155 100 3e-16 >seq20 Length=61044 Score = 116 bits (128), Expect = 4e-21 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGG 94886 ||||||||||| |||||||| || | ||| ||| | || | |||||| |||||||| || Sbjct 3408 GTTGAGGGTATTTTCTTCTCCGGGT-CTTTTGCTTCCATCTTTTGGCTTAAGAAGCGTGG 3466 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || ||||| |||||| |||||| |||||||| ||||||||||||||||| |||||| Sbjct 3467 CCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCAC 3524 >seq635 Length=16049 Score = 102 bits (112), Expect = 1e-16 Identities = 200/293 (68%), Gaps = 2/293 (1%) Strand=Plus/Plus Query 168464 CCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAA 168523 |||||| ||||| | ||| || | ||||| ||||| ||| |||| |||||||| Sbjct 5648 CCACCCTGAAGACGGGAACCGAAGTTACCACTGGGCTCCAGACAGTTGACGTTGTTTGAG 5707 Query 168524 CCCATGTAGTCATTCGCCAACTTGACAATCGTGTCC-GCGAGAGAGACTTCACCGTGGTG 168582 || | | ||| | |||||| ||||||||| | || || || |||||||||| || Sbjct 5708 CCGACGAAGTTTTGCGCCAAACCGACAATCGTCTGTTGCAAGGAAG-CTTCACCGTGCTG 5766 Query 168583 GTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAG 168642 |||||| || | | | ||| | ||||| | | || ||||| || | ||| || Sbjct 5767 GTACGCCGTCATACCGGAGACGTGACCGGCCAATTCGACTACCTTCATATCCTTCTTCAG 5826 Query 168643 ATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCAT 168702 ||| |||| || ||||||| ||||| || || |||||||||||||| | | Sbjct 5827 ATTGCGCCGGAAACAGGCGTACAGGACCTTACGCTGACCCGGCTTGAGACCATCGACAAC 5886 Query 168703 GTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGT 168755 | | |||||| || | |||||||| ||||||| | ||| ||||||| Sbjct 5887 GGAAGGGATAGATCGGATGTTGTCCGCCATACTGAAGAGAATGAGTTCCTTGT 5939 >seq155 Length=53423 Score = 100 bits (110), Expect = 3e-16 Identities = 254/384 (66%), Gaps = 2/384 (1%) Strand=Plus/Minus Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCA 105273 ||||| || |||| |||||| || | ||||| || |||| ||| || | ||| |||| Sbjct 16237 CACCGGCCTATTGCTCTCGGAGTCAACGGTCTGGCCGATGCTTTCCTTGCCTTG-CGCCT 16179 Query 105274 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCA 105333 | ||||| || ||| || ||| | | || | || || ||||| || || || Sbjct 16178 GCCCTTTGACTCGCCCGAGGCAAAGCAGCTGAACATCCAGATCTTCGAGACTATCTACCA 16119 Query 105334 CGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 || ||||| || || ||| | || ||| | ||| | || ||||| | || Sbjct 16118 CGGAGCTCTGACTGCTTCCTCGGAGCTTGCCAAGGAACACGGTACCTACGAAACGTACGA 16059 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453 ||| ||||| | || || || | || || | ||| |||||||| || ||| Sbjct 16058 GGGCTCTCCCGTGTCCCAGGGTATTCTCCAGTATGACATGTGGGATCGTACCCCCACCGA 15999 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 || || |||||||| ||||||||| ||| | ||| || | ||||||||||| Sbjct 15998 TCTCTGGGACTGGGATACTCTCAAGGCCAAGATCGCGCAGACCGGCGTGCGTAACAGTCT 15939 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 || |||| || ||||| || ||| ||| || ||| |||| || || ||||| Sbjct 15938 GCTGGTGGCACCCATGCCGACGGCCAGCACGAGTCAGATCCTGGGCTTCAACGAGTGCTT 15879 Query 105574 TGAACCCTACACGACGAACATCTA 105597 || ||||||||| |||||||||| Sbjct 15878 CGAGCCCTACACGTCGAACATCTA 15855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583223238004480