Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq155 197 2e-45 seq635 113 5e-20 seq20 87.8 2e-12 >seq155 Length=53423 Score = 197 bits (218), Expect = 2e-45 Identities = 409/605 (68%), Gaps = 4/605 (1%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| |||| | ||||| || ||| | |||||||| || || || | ||| | | Sbjct 17292 CCTCAGCATCTGCTGATGCGTGTGGCCGTTGGTATCCATGGAGAGGATATCGAGCGGGCC 17233 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 ||||| || |||| ||| ||| || ||||| ||||| || | || ||||||||| Sbjct 17232 ATCGAGACCTATCACTTGATGTCCCAGAAATACTTCACGCATGCTTCCCCCACCCTGTTC 17173 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || || || || |||||| | | ||||||||||| | |||||||| ||| Sbjct 17172 AATGCCGGAACTCCCCAGCCTCAGCTTGCCTCGTGCTTCCTGGTCGATATGAAGGAGGAC 17113 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || || || || || || || || ||| ||||| ||||||||| ||||| Sbjct 17112 AGCATTGATGGTATTTATGACACTCTGAAGACATGTGCGATGATCTCCAAGACCGCGGGT 17053 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||||||| || || | || | || ||||||| | || | || || || | Sbjct 17052 GGTATCGGTCTCAAC-GTTC-ACCGAATCCGTGCTACTGGGTCCTACATTGGCGGAACCA 16995 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 |||| || | || ||||| ||||||||||| || ||||||||||| || ||||| | Sbjct 16994 ACGGTTCTTCCAACGGTATCGTTCCTATGCTCCGTGTGTTCAACAACACTGCTCGGTATG 16935 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 | |||||||||| ||||| ||| | ||||| ||||| || ||||| |||||| Sbjct 16934 TTGACCAGGGTGGCAACAAGCGTCCGGGTGCTTTCGCTATCTATCTGGAGCCCTGGCACT 16875 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 | || | | || || | || || ||| || || || | ||||| || | || Sbjct 16874 CGGATGTCTTCGAATTCTTGGATCTCCGTAAAAACCACGGCAAGGAAGAAGTGAGAGCCC 16815 Query 53658 GTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 |||| || || ||||| |||| ||||||||| |||||| | ||| ||| ||| Sbjct 16814 GTGATCTTTTCTATGCTCTCTGGACTCCGGACCTGTTCATGAAGCGGGTTGAGGCCAACG 16755 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 || ||| ||| | ||||| |||||| || || || | ||| ||||| || | Sbjct 16754 GTGACTGGACCCTCTTCTGCCCCAACGAGGCTCCAGGACTGGCCGATGTGTACGGAGACG 16695 Query 53778 AGTTT 53782 ||||| Sbjct 16694 AGTTT 16690 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 55744 GACGGTGTGGGAGATTCCACAGAAGAG-TCTGATTGACATGAGTGCTGATCGTGGTGCGT 55802 ||| |||||||||||| | || | ||| | | | | ||| || || || ||||| | Sbjct 15686 GACCGTGTGGGAGATTTCCCA-ACGAGGTATTCTGCAGATGGCGGCCGACCGGGGTGCCT 15628 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 |||| || ||||||||||| || |||||| | || || | || | ||| |||| | | Sbjct 15627 ACATTGATCAGTCCCAGTCGCTCAACATCCACCTGAAGGAGCCCACCATGGGCAAGATCA 15568 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922 | ||||||||| || ||||||| ||| || ||||| || |||||||| ||||||| Sbjct 15567 CCAGCATGCACTTTGCGGGCTGGAAGATGGGCCTGAAGACCGGCATGTACTACCTGCGGA 15508 Query 55923 CC 55924 || Sbjct 15507 CC 15506 >seq635 Length=16049 Score = 113 bits (124), Expect = 5e-20 Identities = 308/464 (66%), Gaps = 12/464 (3%) Strand=Plus/Plus Query 151868 AGCTGAATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGG 151927 |||| ||||||||||||| || || || ||||||| || ||||| ||||| | || Sbjct 5454 AGCTCCATCCGGTACCGATACCATCGGCTCCGTTGATCAAGATCATGGGCACGACGGGCA 5513 Query 151928 CGTAAAACTCCGGCTCCACCTGTTGACCGTCATC--CATCACGTATTTCAAAA-CGGA-- 151982 ||| | |||||||| | || | ||||| || ||| | || | | || ||| Sbjct 5514 TGTAGACTTCCGGCTCGATCTTCTCGCCGTCGTCTTCATTA--TAGGTAAGAAGCGGGTC 5571 Query 151983 ATTGTCAGCCGGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCG 152042 || || || || | | | || || | | || || ||||||| ||||||| || Sbjct 5572 ATCGTGGGC---ATGGTACACGCGGCGCGCAAACGGCGACAGACGCGTGTAGATGTAACG 5628 Query 152043 GGAGCTGGCCGCA-TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGA 152101 | ||| || ||| || |||||| || || | || || | ||| |||||| | Sbjct 5629 AGCGCTAGC-GCAGTCAGAGCCACCCTGAAGACGGGAACCGAAGTTACCACTGGGCTCCA 5687 Query 152102 GGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCA 152161 | ||||| |||||| | ||| ||||| || || |||||| |||||||| |||| Sbjct 5688 GACAGTTGACGTTGTTTGAGCCGACGAAGTTTTGCGCCAAACCGACAATCGTCTGTTGCA 5747 Query 152162 GACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCA 152221 ||||||||||| || ||||||||| | | || || || ||||| | | | Sbjct 5748 AGGAAGCTTCACCGTGCTGGTACGCCGTCATACCGGAGACGTGACCGGCCAATTCGACTA 5807 Query 152222 CCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATG 152281 ||||||| ||| || |||| || | || ||||||||| | ||||| ||||| | Sbjct 5808 CCTTCATATCCTTCTTCAGATTGCGCCGGAAACAGGCGTACAGGACCTTACGCTGACCCG 5867 Query 152282 GTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325 | || | ||| || || ||| ||| || || || || ||||| Sbjct 5868 GCTTGAGACCATCGACAACGGAAGGGATAGATCGGATGTTGTCC 5911 >seq20 Length=61044 Score = 87.8 bits (96), Expect = 2e-12 Identities = 181/267 (68%), Gaps = 7/267 (3%) Strand=Plus/Minus Query 75005 GGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTT 75064 ||| ||||||| | | || |||| ||| ||||| || ||||| || || |||| | Sbjct 3212 GGGCTCCTTGATGTAGGTATCGATCAGAAGGGAGTAGGTTTCCGAGTGGATGTTCTCGAT 3153 Query 75065 GAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAA 75122 | |||| || |||||||| | || ||||| | | ||| || || | |||| Sbjct 3152 CATGATCTGGAACCCGTAGAAACAACGAGCCTCGGGGACCTGAACCTCTCCGCTGAATCG 3093 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATT 75182 || | | | |||| |||| ||||| || ||||||||||| |||||||| || Sbjct 3092 CTCCAGCAGGT--TCTCATTGACAATGCCATCTGAGGCGGCGAAGAAAGCCAGAACGCGA 3035 Query 75183 TTGATAAAGTGGCGCTCATCGTCAGT---GAGTTTGTCCCAATCCTTCAGGTCCCCCGCC 75239 ||| |||| |||||| ||||| | | | |||| |||||| | || ||| || | Sbjct 3034 GAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTTCCAATCGTGCAAATCCTTCGAC 2975 Query 75240 AAATCAATCTCCTCGACCGTCCAGAAA 75266 | ||| || ||||| | ||||||||| Sbjct 2974 AGATCGATTTCCTCAGCGGTCCAGAAA 2948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547180759289600