Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq235 109 4e-19
>seq235
Length=28033
Score = 109 bits (120), Expect = 4e-19
Identities = 251/378 (66%), Gaps = 0/378 (0%)
Strand=Plus/Plus
Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141
|||||| || || || ||||| || | ||| ||||||||| |||| || ||||||
Sbjct 22434 GTGGCAGGGCGGCAGGGCCATTAGCTTAAGGTCGGCGGGGTTCCAAGCGCTCATGATGAT 22493
Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201
||| | ||| | ||||||| | | || |||| ||| |||||| || || ||
Sbjct 22494 GCGGCGGTCGTAGGGGTTGTGTTTCAGCTTGTGCACGACGTCCGCCAGCTGGTCGACGCC 22553
Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261
| |||| |||||| | | ||| ||| || ||||| |||| |||||||||
Sbjct 22554 CTGTCCCGTGTAGTCGGTGTTGGCGTCTACGTAGGGCGCGCCGAAGTGCCGCCACTGGAA 22613
Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321
||||| || || || ||||| || | || | ||| ||| ||| |||||| | ||
Sbjct 22614 GCCGTAGACGGGGCCGAGGTCGCCGACCTCGCGGTGTCCGAGGCCGACCTTGTCGAGGAA 22673
Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTT 30381
|| | | ||||| ||||||||||||| | || ||||| ||||| |||
Sbjct 22674 CTCGCGGCTGCCGTTCCCGTCCCAGATCTTGATGCCGTTCTCGGAGAGGGGAAGGGACGA 22733
Query 30382 TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTT 30441
|||| | || || |||||| ||||| || | | ||| | | || || | |||
Sbjct 22734 TGTGCAGCCGGAGATGAACCATAGCAGTTCGGCGATCACGCCGCGCAGGAACACGCGCTT 22793
Query 30442 GGTCGTGAGGAGGGGAAA 30459
|| ||||||||||| ||
Sbjct 22794 TGTGGTGAGGAGGGGTAA 22811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406284887769984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |