Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq235 100 3e-16
>seq235
Length=28033
Score = 100 bits (110), Expect = 3e-16
Identities = 199/292 (68%), Gaps = 2/292 (1%)
Strand=Plus/Plus
Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
||||||||| ||| || ||||||| || || || ||||| || || || ||
Sbjct 22413 GACGTAGAACTGGGCGAACATGTGGCAGGGCGGCAGGGCCATTAGCTTAAGGTCGGCGGG 22472
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
|||||| |||| ||| | ||| | | ||| | ||||| | |||| ||| | ||
Sbjct 22473 GTTCCAAGCGCTCATGATGATGCGGCGGTCGTAGGGGTTGTGTTTCAGCTTGTGCACGAC 22532
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCGATACTCCG 6905
|| | ||||||||| | |||||||||| ||||| | || || | || || ||
Sbjct 22533 GTCCGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGTGTTGGCGTCTACG-TAGGGCG 22591
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| || ||||| | ||||||||| |||||||| ||||| | |||||| |||| || |
Sbjct 22592 CGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACCTCGCGGTGTC 22651
Query 6966 GGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
|| || |||||| || || || || |||| |||||||||||||
Sbjct 22652 CGAGGCCGACCTTGTCGAGGAACTCGCGGCTGCCGTTCCCGTCCCAGATCTT 22703
Score = 100 bits (110), Expect = 3e-16
Identities = 199/292 (68%), Gaps = 2/292 (1%)
Strand=Plus/Minus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387
||||||||||||| |||| || || || || |||||| || || | ||
Sbjct 22703 AAGATCTGGGACGGGAACGGCAGCCGCGAGTTCCTCGACAAGGTCGGCCTCGGACACCGC 22644
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
|||| |||||| | ||||| |||||||| ||||||||| | ||||| || ||| ||
Sbjct 22643 GAGGTCGGCGACCTCGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCGCCCTA- 22585
Query 34448 CGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGA 34506
|| | || || | ||||| |||||||||| | ||||||||| | |||| | |
Sbjct 22584 CGTAGACGCCAACACCGACTACACGGGACAGGGCGTCGACCAGCTGGCGGACGTCGTGCA 22525
Query 34507 CACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGA 34566
|| |||| | ||||| | ||| | | ||| | ||| |||| |||||||| ||
Sbjct 22524 CAAGCTGAAACACAACCCCTACGACCGCCGCATCATCATGAGCGCTTGGAACCCCGCCGA 22465
Query 34567 TCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618
|| || ||||| || || || ||||||| || ||| |||||||||
Sbjct 22464 CCTTAAGCTAATGGCCCTGCCGCCCTGCCACATGTTCGCCCAGTTCTACGTC 22413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448233531901440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |