Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq430 179 9e-40
seq245 127 5e-24
seq155 102 2e-16
seq768 98.7 2e-15
>seq430
Length=18842
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||||||||| ||||||||||||||||| ||||| | || || | |||||
Sbjct 6728 AGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCC 6787
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || || ||||| | || || ||||| ||||| | || ||||| ||
Sbjct 6788 TCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCT 6847
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||||||||| || || || ||||| || ||||||||
Sbjct 6848 TGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTT 6907
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| || || | |||||
Sbjct 6908 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| |||| ||||| ||||| || || ||| || |||||||| || |||| || ||
Sbjct 6490 ACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGT 6549
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| ||| || || |||||||| || || ||||| || || || ||||| ||||| | ||
Sbjct 6550 CCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCC 6609
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| || || ||||| || ||||| ||||| ||||| |||||||| ||||| |
Sbjct 6610 CTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAA 6669
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||| || ||||| ||||| || || | ||||||
Sbjct 6670 CGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 158 bits (174), Expect = 3e-33
Identities = 155/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || ||||| || ||||||||||| || || | ||||| | |||||
Sbjct 6956 AGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGACCATCC 7015
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| | || || || |||||||| | || |||||||||
Sbjct 7016 TCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGGATACCCTCCTTGTCC 7075
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||||||||| | ||||||||| || ||||| |||
Sbjct 7076 TGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACCTCAAGGGTGATGGTC 7135
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
||||| ||||| ||||| ||
Sbjct 7136 TTTCCAGTGAGGGTCTTGAC 7155
Score = 149 bits (164), Expect = 1e-30
Identities = 155/202 (77%), Gaps = 6/202 (3%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| |||||||| |||||||| || |||||||| || || | || ||
Sbjct 7241 CGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 7300
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || ||||||||||| |||||||| || || || || ||||| || | ||
Sbjct 7301 CGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGGATGCCC 7360
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCG 211070
||||||||||||||||| || ||||| ||||||||||| ||| || ||||||
Sbjct 7361 TCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTC---GCTCGACTCGACCTCG 7417
Query 211071 AGAGTGATCGTCTTTCCCGTGA 211092
|| ||||| ||||| || ||||
Sbjct 7418 AGGGTGATGGTCTTGCCGGTGA 7439
>seq245
Length=44002
Score = 127 bits (140), Expect = 5e-24
Identities = 138/182 (76%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || ||||| | ||||| || |||||||| || |||||||||
Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| || |||| || ||||||||||||||||| || ||||| |||
Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 3900
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| ||||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 3899 ATGGTGTC---GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3843
Query 211104 AA 211105
||
Sbjct 3842 AA 3841
>seq155
Length=53423
Score = 102 bits (112), Expect = 2e-16
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 178229 TACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCA 178288
||||||| ||| || | || || || ||| || ||||| | || || ||||||||
Sbjct 16670 TACTTTTCGTAAAGGGCATCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCG 16729
Query 178289 TTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAG 178348
|||||||||||||| |||| | ||||| ||| || || |||||||| ||||| |
Sbjct 16730 TTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGA 16789
Query 178349 GTCCAGATGGCATAGAAAATCTCTCTGGCTCTCA 178382
||||||| |||||||||| || | ||||||||
Sbjct 16790 GTCCAGAGAGCATAGAAAAGATCACGGGCTCTCA 16823
>seq768
Length=20780
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| || ||||| || |||||||| || |||| ||| || | || ||
Sbjct 8399 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 8458
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
||||||||||| || |||||||| || || || ||||| || || | ||| ||||||||
Sbjct 8459 TCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTC 8517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159075484376480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |