Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq430 158 3e-33
seq245 111 4e-19
seq1376 98.7 2e-15
seq768 86.0 1e-11
>seq430
Length=18842
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||| || |||||||||| |||||||||| || ||| | |||||
Sbjct 6728 AGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCC 6787
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| || || ||||| | || || |||||||| || || || ||||| |||
Sbjct 6788 TCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCT 6847
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| |||||||||||||| | ||||| || | |||||||||
Sbjct 6848 TGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTT 6907
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | ||| | ||||||
Sbjct 6908 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
Score = 132 bits (146), Expect = 1e-25
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | |||||| |||||||| ||||||| ||||| |||| | ||
Sbjct 6946 ACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGT 7005
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||||||||| | || || || || || || |||||
Sbjct 7006 GCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGGATACC 7065
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||||||| ||||||||||| || ||| || || |
Sbjct 7066 CTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACCTCAAG 7125
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| ||||| || ||
Sbjct 7126 GGTGATGGTCTTTCCAGT 7143
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| |||| ||||| ||||| || || || || |||| ||||| || | | ||
Sbjct 6490 ACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGT 6549
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || || ||||| || || || |||||||| || || ||
Sbjct 6550 CCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCC 6609
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||| ||||| ||| || ||||| ||||| ||| ||||||| || ||
Sbjct 6610 CTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAA 6669
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||||||| || | || || | ||| | |||||
Sbjct 6670 CGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||| ||||| || ||||| || || |||| ||||| |||| || |||
Sbjct 7241 CGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 7300
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || |||||||| ||||||||||| || || || || || || || || ||
Sbjct 7301 CGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGGATGCCC 7360
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || ||||||||||| | || || || |
Sbjct 7361 TCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGG 7420
Query 225673 GTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 7421 GTGATGGTCTTGCCGGT 7437
>seq245
Length=44002
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || || | ||||| || |||||||| ||||||||||||
Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || |||||||| ||||| || |||||||| |||||||| ||| || |||
Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 3900
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| | || ||||| | || || ||||| ||||||| || || | |||
Sbjct 3899 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3841
>seq1376
Length=5229
Score = 98.7 bits (108), Expect = 2e-15
Identities = 186/273 (68%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500
|| ||||||||||| ||| || || ||| | ||||||| |||||| | |
Sbjct 3070 ACTTTATATTTAATGCTTGCATTATTCTCAGGTTTATTAGGTACAGCTTTTTCTGTATTA 3129
Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560
||||| ||||||||| ||| || ||| |||| | | ||| ||| |||| | ||
Sbjct 3130 ATAAGATTAGAATTATCTGGACCAGGTGTTCAATTTGT---TGGAGATAACCAATTATAT 3186
Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620
|| ||| || || || || || | | ||||||||||| | |||||||| | | |
Sbjct 3187 AATAGTATAATAACAGCACACGCTATAATGATGATTTTCTTCATGGTTATGCCAGCTTTA 3246
Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680
|| || || || || |||| || | || ||| | | || | |||||||||||| |||
Sbjct 3247 ATCGGAGGATTTGGTAATTTCTTATTACCGTTATTAGTAGGAGGTCCTGATATGGCATTT 3306
Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713
|| || | || || || ||||| |||||| ||
Sbjct 3307 CCTAGATTAAATAACATTAGTTTCTGATTATTA 3339
>seq768
Length=20780
Score = 86.0 bits (94), Expect = 1e-11
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || ||||| || || || || || |||| ||||| || | | |||
Sbjct 8389 ACGCAGGCGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 8448
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| ||||||||||| || || || |||||||| || || ||
Sbjct 8449 ACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCC 8508
Query 225612 TTCCTTGTCT 225621
|||||||||
Sbjct 8509 CTCCTTGTCT 8518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192452481015488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |