Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq430 158 3e-33 seq245 111 4e-19 seq1376 98.7 2e-15 seq768 86.0 1e-11 >seq430 Length=18842 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||| || |||||||||| |||||||||| || ||| | ||||| Sbjct 6728 AGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAGAGTGCGGCCATCC 6787 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || || ||||| | || || |||||||| || || || ||||| ||| Sbjct 6788 TCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCT 6847 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| |||||||||||||| | ||||| || | ||||||||| Sbjct 6848 TGGATCTTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCACCTCCAGCGTGATCGTT 6907 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | |||||| Sbjct 6908 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | |||||| |||||||| ||||||| ||||| |||| | || Sbjct 6946 ACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGT 7005 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| | || || || || || || ||||| Sbjct 7006 GCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGGGATACC 7065 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||||||||| || ||| || || | Sbjct 7066 CTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACCTCAAG 7125 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 7126 GGTGATGGTCTTTCCAGT 7143 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| ||||| ||||| || || || || |||| ||||| || | | || Sbjct 6490 ACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGT 6549 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || || ||||| || || || |||||||| || || || Sbjct 6550 CCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGGATGCC 6609 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| ||||| ||| || ||||| ||||| ||| ||||||| || || Sbjct 6610 CTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCACCTCCAA 6669 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||||||| || | || || | ||| | ||||| Sbjct 6670 CGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| ||||| || ||||| || || |||| ||||| |||| || ||| Sbjct 7241 CGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 7300 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| ||||||||||| || || || || || || || || || Sbjct 7301 CGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGGATGCCC 7360 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||||||||| | || || || | Sbjct 7361 TCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGG 7420 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 7421 GTGATGGTCTTGCCGGT 7437 >seq245 Length=44002 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| |||||||||||| Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| ||||| || |||||||| |||||||| ||| || ||| Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 3900 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 3899 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3841 >seq1376 Length=5229 Score = 98.7 bits (108), Expect = 2e-15 Identities = 186/273 (68%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| ||| || || ||| | ||||||| |||||| | | Sbjct 3070 ACTTTATATTTAATGCTTGCATTATTCTCAGGTTTATTAGGTACAGCTTTTTCTGTATTA 3129 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 ||||| ||||||||| ||| || ||| |||| | | ||| ||| |||| | || Sbjct 3130 ATAAGATTAGAATTATCTGGACCAGGTGTTCAATTTGT---TGGAGATAACCAATTATAT 3186 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||| || || || || || | | ||||||||||| | |||||||| | | | Sbjct 3187 AATAGTATAATAACAGCACACGCTATAATGATGATTTTCTTCATGGTTATGCCAGCTTTA 3246 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 || || || || || |||| || | || ||| | | || | |||||||||||| ||| Sbjct 3247 ATCGGAGGATTTGGTAATTTCTTATTACCGTTATTAGTAGGAGGTCCTGATATGGCATTT 3306 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || || || ||||| |||||| || Sbjct 3307 CCTAGATTAAATAACATTAGTTTCTGATTATTA 3339 >seq768 Length=20780 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || || || || || |||| ||||| || | | ||| Sbjct 8389 ACGCAGGCGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 8448 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || || |||||||| || || || Sbjct 8449 ACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCC 8508 Query 225612 TTCCTTGTCT 225621 ||||||||| Sbjct 8509 CTCCTTGTCT 8518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192452481015488